Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC008749.1-201ENST00000597650 306 ntBASIC2.09□□□□□ -2.07
GGPS1O95749 AC146944.4-201ENST00000602697 718 ntBASIC2.09□□□□□ -2.07
GGPS1O95749 AL022345.1-201ENST00000607292 135 ntBASIC2.09□□□□□ -2.07
GGPS1O95749 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
GGPS1O95749 RNU1-76P-201ENST00000362903 159 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 RNU6-1252P-201ENST00000363054 104 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 RNU6-877P-201ENST00000383868 107 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 RNU6-784P-201ENST00000384330 106 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 Y_RNA.573-201ENST00000384763 105 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 MIR521-1-201ENST00000384902 87 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
GGPS1O95749 RPS26P42-201ENST00000413485 326 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 PMCHL2-203ENST00000457791 237 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 snoU13.6-201ENST00000458785 104 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 RNU7-187P-201ENST00000458985 68 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 RPS29P11-201ENST00000496507 171 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 RNU6-1098P-201ENST00000516772 96 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.08□□□□□ -2.08
GGPS1O95749 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 AP005660.1-201ENST00000522972 293 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.08□□□□□ -2.08
GGPS1O95749 AC005034.5-201ENST00000604219 466 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 AL138726.1-201ENST00000614873 333 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 AC084768.2-201ENST00000622736 221 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
GGPS1O95749 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.08□□□□□ -2.08
GGPS1O95749 RNU6-534P-201ENST00000364877 106 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 Y_RNA.414-201ENST00000384011 101 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 RNU6-968P-201ENST00000384076 107 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 RNU6-1093P-201ENST00000391194 107 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 AC123900.1-201ENST00000420390 96 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.07□□□□□ -2.08
GGPS1O95749 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.07□□□□□ -2.08
GGPS1O95749 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 RNU5F-4P-201ENST00000516581 114 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 RNU6-256P-201ENST00000516747 97 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 AP005639.2-201ENST00000527592 928 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
GGPS1O95749 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.07□□□□□ -2.08
GGPS1O95749 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 AC243960.4-201ENST00000600532 288 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 CYP2C61P-201ENST00000604072 290 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GGPS1O95749 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 AC130454.1-201ENST00000622948 401 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 LINC02555-201ENST00000563933 1951 ntBASIC2.07□□□□□ -2.08
GGPS1O95749 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
GGPS1O95749 RNU6-23P-201ENST00000363283 107 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 Y_RNA.135-201ENST00000363439 95 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 SNORA32.2-201ENST00000384049 122 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 RNU6-95P-201ENST00000384697 107 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 RNA5SP118-201ENST00000410385 109 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 RNA5SP494-201ENST00000410653 129 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.06□□□□□ -2.08
GGPS1O95749 AL035666.1-201ENST00000446195 348 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.06□□□□□ -2.08
GGPS1O95749 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.06□□□□□ -2.08
GGPS1O95749 TOMM22P6-201ENST00000465035 409 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 MTCYBP18-201ENST00000501056 747 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 RNA5SP458-201ENST00000516188 119 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.06□□□□□ -2.08
GGPS1O95749 MRPS36P4-201ENST00000534436 298 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.06□□□□□ -2.08
GGPS1O95749 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.06□□□□□ -2.08
GGPS1O95749 MIR3169-201ENST00000578032 83 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 AC090517.2-201ENST00000614966 680 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 AC090617.10-201ENST00000624308 134 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 MIR3688-2-201ENST00000636963 87 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 AC068137.4-201ENST00000638485 296 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 KPNA2P1-201ENST00000458289 1591 ntBASIC2.06□□□□□ -2.08
GGPS1O95749 Y_RNA.140-201ENST00000363474 103 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 RNA5SP493-201ENST00000364115 91 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 SNORD114-6-201ENST00000364393 72 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 Y_RNA.295-201ENST00000364918 102 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 SNORD31B-201ENST00000364977 69 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 RNA5SP489-201ENST00000410986 109 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 AL513185.2-201ENST00000425543 193 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 RNU1-131P-201ENST00000458943 161 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 RNU7-14P-201ENST00000459331 62 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 MRPS17P9-201ENST00000511924 393 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 AC107393.1-201ENST00000512403 346 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.05□□□□□ -2.08
GGPS1O95749 ANP32BP3-201ENST00000559213 706 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
GGPS1O95749 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 MIR3976-201ENST00000606807 139 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 MIR8081-201ENST00000611533 95 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 AL590240.4-201ENST00000616908 390 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 U1.36-201ENST00000620684 176 ntBASIC2.05□□□□□ -2.08
GGPS1O95749 AC091932.3-201ENST00000624223 323 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms