Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RNU6-414P-201ENST00000363705 104 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RNY1-201ENST00000364228 113 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 Y_RNA.296-201ENST00000364930 108 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RNU6-296P-201ENST00000384608 107 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 SNORD37.1-201ENST00000390968 65 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RNU6-1158P-201ENST00000391167 107 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RNU6-1093P-201ENST00000391194 107 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 MIR1276-201ENST00000408707 83 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN9O95484 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN9O95484 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.4□□□□□ -2.19
CLDN9O95484 ATP5J2P3-201ENST00000451550 258 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 MTCO2P18-201ENST00000457151 658 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 snoU13.6-201ENST00000458785 104 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 snoU13.9-201ENST00000458927 103 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 AC010531.2-201ENST00000465012 153 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RPL9P9-202ENST00000466501 579 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RPS3AP17-201ENST00000472594 777 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RPS23P5-201ENST00000495419 428 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 HMGN1P13-201ENST00000505795 138 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 RNU6-612P-201ENST00000516909 102 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 OSBPL9P5-201ENST00000542581 171 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 SNORA59B-202ENST00000578183 701 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 AC069114.2-201ENST00000604699 304 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 AC007684.1-201ENST00000609671 477 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 AC005520.5-201ENST00000613926 164 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 MIR6779-201ENST00000617283 64 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 AC078883.4-201ENST00000623218 367 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 AC068205.3-201ENST00000636385 468 ntBASIC1.4□□□□□ -2.19
CLDN9O95484 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
CLDN9O95484 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 Y_RNA.255-201ENST00000364581 97 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 SNORA67.5-201ENST00000391036 107 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 MIR1267-201ENST00000408723 78 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 AL353193.1-201ENST00000421444 268 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 USP9YP28-201ENST00000435142 589 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 AC007395.1-201ENST00000451333 677 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
CLDN9O95484 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CLDN9O95484 RN7SKP298-201ENST00000515950 94 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 SNORA14.1-201ENST00000516113 141 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 RPL17P51-201ENST00000605218 238 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLDN9O95484 Z69908.1-201ENST00000622603 247 ntBASIC1.39□□□□□ -2.19
CLDN9O95484 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLDN9O95484 Y_RNA.1-201ENST00000352915 104 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 RNU6-862P-201ENST00000362804 105 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 Y_RNA.132-201ENST00000363421 102 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 RNU6-1103P-201ENST00000384150 107 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 MTND3P9-201ENST00000429526 346 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 AL606489.2-201ENST00000433886 234 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.38□□□□□ -2.19
CLDN9O95484 AC099677.2-201ENST00000436385 175 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 MTCO1P44-201ENST00000441935 243 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 SNRPGP13-201ENST00000442212 177 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN9O95484 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN9O95484 snoU13.30-201ENST00000458951 104 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN9O95484 RNU6-189P-201ENST00000516120 101 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 RNU6-1038P-201ENST00000516516 104 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 SNORD60.2-201ENST00000516883 86 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.38□□□□□ -2.19
CLDN9O95484 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN9O95484 MTND3P12-201ENST00000559068 328 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 MIR4424-201ENST00000585257 86 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 Z99497.2-201ENST00000603634 310 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
CLDN9O95484 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLDN9O95484 Y_RNA.67-201ENST00000362870 100 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 MIR520A-201ENST00000384862 85 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 RNU2-7P-201ENST00000410794 178 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AC090960.1-201ENST00000421072 306 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN9O95484 UBE2V1P8-201ENST00000437166 265 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AL357134.1-201ENST00000445848 426 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 RPS4XP11-201ENST00000446897 772 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 HSPE1P24-201ENST00000450782 238 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 TPTE2P5-203ENST00000458118 728 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 RNU6-1037P-201ENST00000459571 107 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AC091435.1-201ENST00000505442 584 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 HMGB1P29-201ENST00000505659 499 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 RNU6-323P-201ENST00000521915 107 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN9O95484 AC104576.1-201ENST00000524225 88 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AP005597.4-201ENST00000526762 229 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AC025423.5-201ENST00000550230 219 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AC087683.1-201ENST00000591187 441 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AC092747.3-201ENST00000603769 301 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 AP001485.1-201ENST00000604799 199 ntBASIC1.37□□□□□ -2.19
CLDN9O95484 RMST_2.1-201ENST00000617263 136 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms