Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU4-12P-201ENST00000365233 139 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 Y_RNA.373-201ENST00000365600 103 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 SNORA12-201ENST00000391162 147 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 SNORD115-47-201ENST00000391226 86 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 EIF4E2P1-201ENST00000393781 255 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 RNU2-32P-201ENST00000411193 191 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 USP9YP18-201ENST00000425912 695 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AC244670.1-201ENST00000436879 112 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.45□□□□□ -2.18
CTDNEP1O95476 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AC011352.1-201ENST00000512300 793 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 RNU6-1332P-201ENST00000516666 104 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 RN7SKP256-201ENST00000517201 314 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AC087854.1-201ENST00000519706 414 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.45□□□□□ -2.18
CTDNEP1O95476 AC078795.3-201ENST00000602913 472 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AL034555.1-201ENST00000604816 211 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AC018889.1-201ENST00000605372 397 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AC004492.1-201ENST00000607036 742 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 AL512598.1-201ENST00000610158 273 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 MIR1248-201ENST00000629190 106 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 SNORD98-201ENST00000636377 67 ntBASIC1.45□□□□□ -2.18
CTDNEP1O95476 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.45□□□□□ -2.18
CTDNEP1O95476 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CTDNEP1O95476 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.45□□□□□ -2.18
CTDNEP1O95476 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 Y_RNA.9-201ENST00000362354 101 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 Y_RNA.89-201ENST00000363031 102 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 RNU6-1317P-201ENST00000364582 104 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CTDNEP1O95476 MIR29C-201ENST00000385231 88 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 SNORA26.3-201ENST00000391119 136 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 Y_RNA.597-201ENST00000410463 100 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 RN7SKP61-201ENST00000410642 295 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 RNU6-1245P-201ENST00000411130 106 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AP000275.1-201ENST00000411943 390 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 BTF3P4-201ENST00000418852 495 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AL590135.1-201ENST00000422215 156 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC019205.3-201ENST00000424573 156 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AL133396.1-201ENST00000432048 687 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 USP9YP28-201ENST00000435142 589 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 AL359672.1-201ENST00000442302 409 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC016700.2-201ENST00000446011 156 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC015911.1-201ENST00000495111 156 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC008628.2-201ENST00000502605 298 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 RNU1-92P-201ENST00000517017 135 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 RNU6-667P-201ENST00000517186 102 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 AP000763.2-201ENST00000540641 163 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC018630.3-201ENST00000542637 96 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 HSPE1P4-201ENST00000550617 308 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 ZNF519P2-201ENST00000557032 169 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
CTDNEP1O95476 AC090617.10-201ENST00000624308 134 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 MIR3688-2-201ENST00000636963 87 ntBASIC1.44□□□□□ -2.18
CTDNEP1O95476 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CTDNEP1O95476 Y_RNA.140-201ENST00000363474 103 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 SNORD32B-201ENST00000364460 84 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 RNA5SP465-201ENST00000391195 109 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 MIR450B-201ENST00000401182 78 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 MIR1262-201ENST00000408276 93 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 RNA5SP201-201ENST00000410316 124 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.43□□□□□ -2.18
CTDNEP1O95476 ARL5AP1-201ENST00000418991 388 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 EIF4EP2-201ENST00000422816 654 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC092989.1-201ENST00000481235 277 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 FAM206BP-201ENST00000510179 541 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC005741.1-201ENST00000511094 432 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC025465.4-201ENST00000513422 638 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 RNU6-237P-201ENST00000515985 71 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 RNU6-718P-201ENST00000516166 105 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 RNU6-612P-201ENST00000516909 102 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC022616.8-201ENST00000533569 253 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 SCOCP1-201ENST00000554676 349 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC022254.1-201ENST00000567857 235 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.43□□□□□ -2.18
CTDNEP1O95476 CPDP1-201ENST00000579660 283 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC068790.6-201ENST00000602558 258 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AL359314.1-201ENST00000616913 261 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 U4.5-201ENST00000617137 123 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CTDNEP1O95476 AC073869.6-201ENST00000640656 341 ntBASIC1.43□□□□□ -2.18
CTDNEP1O95476 AP000560.1-201ENST00000624150 1937 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 RNA5SP432-201ENST00000362480 116 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 RNU6-546P-201ENST00000383991 107 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 Y_RNA.504-201ENST00000384481 104 ntBASIC1.42□□□□□ -2.18
CTDNEP1O95476 MIR29B2-201ENST00000385055 81 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms