Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SEMA3DO95025 Y_RNA.255-201ENST00000364581 97 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 Y_RNA.296-201ENST00000364930 108 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 SNORD31B-201ENST00000364977 69 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 Y_RNA.553-201ENST00000384670 102 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 RNU6-1093P-201ENST00000391194 107 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.21□□□□□ -2.22
SEMA3DO95025 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.21□□□□□ -2.22
SEMA3DO95025 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.21□□□□□ -2.22
SEMA3DO95025 AC099677.2-201ENST00000436385 175 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AC092473.1-201ENST00000441098 221 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 MTCO1P44-201ENST00000441935 243 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.21□□□□□ -2.22
SEMA3DO95025 MTCO2P18-201ENST00000457151 658 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 snoU13.9-201ENST00000458927 103 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AC010531.2-201ENST00000465012 153 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 MTCO3P38-201ENST00000468910 766 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.21□□□□□ -2.22
SEMA3DO95025 AC091435.1-201ENST00000505442 584 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 RNU6-567P-201ENST00000516746 107 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 RNU6-612P-201ENST00000516909 102 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.21□□□□□ -2.22
SEMA3DO95025 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AC087683.1-201ENST00000591187 441 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AC064836.2-201ENST00000609491 462 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SEMA3DO95025 AC005520.5-201ENST00000613926 164 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 AC083806.3-201ENST00000614016 455 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
SEMA3DO95025 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SEMA3DO95025 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SEMA3DO95025 AL159152.1-201ENST00000635019 2587 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 ELL2P3-201ENST00000457883 1602 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SEMA3DO95025 RNU6-545P-201ENST00000362681 104 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 RNU1-76P-201ENST00000362903 159 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 RNA5SP99-201ENST00000364020 114 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AL663109.1-201ENST00000411498 844 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.2□□□□□ -2.22
SEMA3DO95025 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.2□□□□□ -2.22
SEMA3DO95025 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.2□□□□□ -2.22
SEMA3DO95025 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 TPTE2P5-203ENST00000458118 728 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AC016925.1-201ENST00000458303 298 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 RPL31P3-201ENST00000458430 332 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 RPL9P9-202ENST00000466501 579 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 RPS23P5-201ENST00000495419 428 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AC010424.1-201ENST00000506336 297 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AC108078.1-201ENST00000508073 725 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 RN7SKP298-201ENST00000515950 94 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 SUMO2P18-201ENST00000518873 252 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.2□□□□□ -2.22
SEMA3DO95025 DEFB131C-201ENST00000528817 165 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.2□□□□□ -2.22
SEMA3DO95025 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.2□□□□□ -2.22
SEMA3DO95025 AL118558.2-201ENST00000556294 238 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AC006362.1-201ENST00000567392 174 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AC016727.1-205ENST00000605437 569 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.2□□□□□ -2.22
SEMA3DO95025 AC091812.1-201ENST00000432235 1948 ntBASIC1.2□□□□□ -2.22
SEMA3DO95025 MIR378A-201ENST00000362177 66 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 RNU6-862P-201ENST00000362804 105 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 RNU6-1026P-201ENST00000384465 108 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 AC090960.1-201ENST00000421072 306 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 MTND3P9-201ENST00000429526 346 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.19□□□□□ -2.22
SEMA3DO95025 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.19□□□□□ -2.22
SEMA3DO95025 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.19□□□□□ -2.22
SEMA3DO95025 snoU13.30-201ENST00000458951 104 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 RPS29P27-201ENST00000463711 170 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 AC087477.1-201ENST00000465747 340 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 RNA5SP445-201ENST00000515889 115 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 RNU6-902P-201ENST00000517212 91 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 AC104576.1-201ENST00000524225 88 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 AC025423.5-201ENST00000550230 219 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.19□□□□□ -2.22
SEMA3DO95025 AC023043.2-201ENST00000589678 1026 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 AC064807.4-201ENST00000607201 407 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.19□□□□□ -2.22
SEMA3DO95025 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.19□□□□□ -2.22
SEMA3DO95025 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SEMA3DO95025 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SEMA3DO95025 AP000568.1-201ENST00000282964 442 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 SNORA7.1-201ENST00000363750 139 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 Y_RNA.378-201ENST00000365652 113 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 RNU6-877P-201ENST00000383868 107 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 Y_RNA.409-201ENST00000383990 98 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 RNU6-418P-201ENST00000384035 107 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 MIR549A-201ENST00000385268 96 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 RNU6-1106P-201ENST00000390845 107 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 SNORD37.1-201ENST00000390968 65 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 RNU4-55P-201ENST00000410731 137 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms