Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 SNORD115-3-201ENST00000363100 82 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 Y_RNA.123-201ENST00000363338 102 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 RNU6-457P-201ENST00000363999 107 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 ZNF885P-201ENST00000420174 1098 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 CBX3P6-201ENST00000430257 527 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 IFNA20P-201ENST00000436840 528 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
CSDE1O75534 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.92□□□□□ -2.1
CSDE1O75534 RNU7-66P-201ENST00000459469 62 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.92□□□□□ -2.1
CSDE1O75534 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.92□□□□□ -2.1
CSDE1O75534 RNU6-567P-201ENST00000516746 107 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 RNU6-1314P-201ENST00000517139 104 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.92□□□□□ -2.1
CSDE1O75534 AC243960.4-201ENST00000600532 288 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 Z98751.3-201ENST00000604447 521 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 AC007014.2-201ENST00000615581 479 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 AC009033.1-201ENST00000624279 431 ntBASIC1.92□□□□□ -2.1
CSDE1O75534 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CSDE1O75534 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CSDE1O75534 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CSDE1O75534 RNU6-562P-201ENST00000362731 107 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 MIR208B-201ENST00000401172 77 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 AC096920.1-201ENST00000423991 241 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 AL590632.1-201ENST00000424289 371 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 RNU7-187P-201ENST00000458985 68 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 RN7SKP210-201ENST00000459176 261 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 RPS29P27-201ENST00000463711 170 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 MIR449C-201ENST00000516047 92 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.91□□□□□ -2.1
CSDE1O75534 AC018630.3-201ENST00000542637 96 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.91□□□□□ -2.1
CSDE1O75534 AC109446.1-201ENST00000566172 220 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 MIR3683-201ENST00000580847 82 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 AL078605.1-201ENST00000603529 500 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 U6atac.1-201ENST00000616025 117 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.91□□□□□ -2.1
CSDE1O75534 SNORA43.4-201ENST00000629559 138 ntBASIC1.91□□□□□ -2.1
CSDE1O75534 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CSDE1O75534 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CSDE1O75534 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CSDE1O75534 SNORA26.3-201ENST00000391119 136 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CSDE1O75534 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CSDE1O75534 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.9□□□□□ -2.11
CSDE1O75534 AL158823.1-201ENST00000418441 478 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 AL513185.2-201ENST00000425543 193 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 Z82205.1-201ENST00000428456 297 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 USP9YP28-201ENST00000435142 589 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 RPL23AP6-201ENST00000446637 472 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CSDE1O75534 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.9□□□□□ -2.11
CSDE1O75534 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.9□□□□□ -2.11
CSDE1O75534 AC021146.2-201ENST00000504736 556 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
CSDE1O75534 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.9□□□□□ -2.11
CSDE1O75534 GNAI2P1-201ENST00000541815 315 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.9□□□□□ -2.11
CSDE1O75534 CYP4A27P-201ENST00000567218 190 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.9□□□□□ -2.11
CSDE1O75534 AC023043.2-201ENST00000589678 1026 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 AP000654.2-201ENST00000605633 586 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 MIR3976-201ENST00000606807 139 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 AL138726.1-201ENST00000614873 333 ntBASIC1.9□□□□□ -2.11
CSDE1O75534 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CSDE1O75534 U3.9-201ENST00000363823 204 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 RNU6-968P-201ENST00000384076 107 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 RNU6-1013P-201ENST00000384180 107 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 Y_RNA.505-201ENST00000384489 102 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.89□□□□□ -2.11
CSDE1O75534 MTND4LP16-201ENST00000440828 295 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 NFU1P2-201ENST00000448700 469 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 PCMTD1P1-201ENST00000455560 355 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 PRELID3BP1-201ENST00000457142 540 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 AC130509.1-201ENST00000464158 433 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 RPS29P25-201ENST00000481709 171 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.89□□□□□ -2.11
CSDE1O75534 RNU2-44P-201ENST00000516795 194 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
CSDE1O75534 MIR3942-201ENST00000585264 109 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 AC008749.1-201ENST00000597650 306 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 MIR8076-201ENST00000611401 83 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 AC005296.1-201ENST00000616145 209 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 AC002553.4-201ENST00000616896 331 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.89□□□□□ -2.11
CSDE1O75534 MIR1248-201ENST00000629190 106 ntBASIC1.89□□□□□ -2.11
CSDE1O75534 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CSDE1O75534 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CSDE1O75534 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms