Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC018448.1-201ENST00000552843 316 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 AC068831.7-201ENST00000616954 363 ntBASIC4.34□□□□□ -1.71
PTCD1O75127 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTCD1O75127 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTCD1O75127 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTCD1O75127 AC018529.3-201ENST00000624212 2254 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 RNU6-1255P-201ENST00000363434 112 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 Y_RNA.136-201ENST00000363444 102 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 RNU6-799P-201ENST00000363567 107 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 RNU6-283P-201ENST00000364788 107 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 SNORD116-14-201ENST00000383894 92 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 SNORD116-17-201ENST00000383929 92 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 RNU6-198P-201ENST00000384258 104 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 SNORD116-15-201ENST00000384445 92 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 SNORD116-19-201ENST00000384729 92 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 MIR320B2-201ENST00000408479 138 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 AL714022.1-201ENST00000439897 151 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 AL137159.1-201ENST00000452808 512 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 AC007215.1-201ENST00000464893 276 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 AC091179.3-201ENST00000474761 144 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 AC006445.1-201ENST00000491925 405 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 RNU5F-2P-201ENST00000516066 82 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 RNA5SP309-201ENST00000516670 106 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 DEFB131C-201ENST00000528817 165 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 MIR4298-201ENST00000584380 73 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 MIR486-1-201ENST00000612171 68 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.33□□□□□ -1.72
PTCD1O75127 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCD1O75127 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCD1O75127 AC099654.7-201ENST00000635788 2127 ntBASIC4.33□□□□□ -1.72
PTCD1O75127 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCD1O75127 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD1O75127 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCD1O75127 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCD1O75127 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PTCD1O75127 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCD1O75127 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 RNU6-748P-201ENST00000384648 107 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 MIR147B-201ENST00000390185 80 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 RNU2-2P-201ENST00000410396 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCD1O75127 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCD1O75127 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCD1O75127 YWHAEP4-201ENST00000505390 198 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 RPL23AP94-201ENST00000512518 302 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 Y_RNA.686-201ENST00000516548 134 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 SNORD19.2-201ENST00000516978 73 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 MIR5692C2-201ENST00000577959 77 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 MIR3923-201ENST00000579521 83 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 RPS15AP11-201ENST00000594193 385 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 AC022441.3-201ENST00000605737 136 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 RNU2-4P-201ENST00000606190 192 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.15-201ENST00000611544 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.16-201ENST00000613119 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.12-201ENST00000613778 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.9-201ENST00000615427 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.11-201ENST00000616345 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.2-201ENST00000616535 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.3-201ENST00000617785 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.19-201ENST00000618602 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 RNU2-1-201ENST00000618664 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.6-201ENST00000619225 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.5-201ENST00000619465 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 U2.10-201ENST00000620268 191 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCD1O75127 TNPO1P3-201ENST00000436471 2662 ntBASIC4.32□□□□□ -1.72
PTCD1O75127 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD1O75127 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCD1O75127 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCD1O75127 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCD1O75127 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCD1O75127 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTCD1O75127 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD1O75127 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCD1O75127 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCD1O75127 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD1O75127 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCD1O75127 MFSD8-233ENST00000641482 4860 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 CBX3P9-201ENST00000402326 552 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 AC245291.1-201ENST00000419501 328 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCD1O75127 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCD1O75127 AC091179.1-201ENST00000461606 579 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 RN7SL93P-201ENST00000463035 293 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCD1O75127 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.31□□□□□ -1.72
PTCD1O75127 LARP7P3-201ENST00000579888 337 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCD1O75127 AL034555.1-201ENST00000604816 211 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 AC092628.2-201ENST00000622492 339 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 snoU18.1-201ENST00000629629 71 ntBASIC4.31□□□□□ -1.72
PTCD1O75127 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD1O75127 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCD1O75127 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCD1O75127 AC068647.1-201ENST00000489539 2265 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 AC092593.1-201ENST00000515413 1815 ntBASIC4.3□□□□□ -1.72
PTCD1O75127 RNU6-245P-201ENST00000384020 107 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms