Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU1-96P-201ENST00000364163 162 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.23□□□□□ -2.21
CLOCKO15516 RNU6-877P-201ENST00000383868 107 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 RNU6-517P-201ENST00000384362 110 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 MIR548B-201ENST00000385247 97 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 MTCO2P11-201ENST00000431069 680 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 USP9YP28-201ENST00000435142 589 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 AC027119.1-201ENST00000440877 241 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.23□□□□□ -2.21
CLOCKO15516 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.23□□□□□ -2.21
CLOCKO15516 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.23□□□□□ -2.21
CLOCKO15516 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 RNU6-1041P-201ENST00000516254 102 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 RNU6-856P-201ENST00000516959 98 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 RRN3P3-201ENST00000549207 578 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 CTHRC1P1-201ENST00000605383 469 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 AC008536.2-201ENST00000607284 349 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 AC095038.3-201ENST00000634439 195 ntBASIC1.23□□□□□ -2.21
CLOCKO15516 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CLOCKO15516 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 RNU6-1106P-201ENST00000390845 107 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 RNU6-1093P-201ENST00000391194 107 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AL117342.1-201ENST00000404861 406 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.22□□□□□ -2.21
CLOCKO15516 MTATP6P18-201ENST00000417994 673 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 MTCO3P29-201ENST00000432119 779 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.22□□□□□ -2.21
CLOCKO15516 MTND1P27-201ENST00000451117 902 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 OR2AQ1P-201ENST00000451972 200 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AC067942.3-201ENST00000512025 362 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.22□□□□□ -2.21
CLOCKO15516 MIR3913-1-201ENST00000577744 102 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 SNORA59B-202ENST00000578183 701 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 MTATP6P3-201ENST00000581686 676 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 MIR3976-201ENST00000606807 139 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AC109347.2-201ENST00000610220 349 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 AC091895.1-201ENST00000624494 256 ntBASIC1.22□□□□□ -2.21
CLOCKO15516 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.22□□□□□ -2.21
CLOCKO15516 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
CLOCKO15516 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.22□□□□□ -2.21
CLOCKO15516 AC009541.1-201ENST00000438279 2662 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 RNU6-545P-201ENST00000362681 104 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 MIR300-201ENST00000401138 83 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 AL161935.2-201ENST00000414627 60 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 CETN4P-201ENST00000432407 469 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 AC069257.2-201ENST00000441819 155 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 AP003033.1-201ENST00000527244 415 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 AC016256.1-201ENST00000547971 354 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 HIF1AP1-201ENST00000553642 175 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 AC087683.2-201ENST00000611384 326 ntBASIC1.21□□□□□ -2.22
CLOCKO15516 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
CLOCKO15516 Y_RNA.226-201ENST00000364337 114 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 SNORA25.9-201ENST00000365087 128 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.2□□□□□ -2.22
CLOCKO15516 AC090960.1-201ENST00000421072 306 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AC060773.1-201ENST00000421698 310 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AL358934.1-201ENST00000432346 324 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AL031667.1-201ENST00000440222 725 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.2□□□□□ -2.22
CLOCKO15516 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.2□□□□□ -2.22
CLOCKO15516 RNU7-138P-201ENST00000459479 64 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 MTCYBP18-201ENST00000501056 747 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AC010486.2-201ENST00000505572 483 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.2□□□□□ -2.22
CLOCKO15516 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.2□□□□□ -2.22
CLOCKO15516 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.2□□□□□ -2.22
CLOCKO15516 AC090115.3-201ENST00000553218 849 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.2□□□□□ -2.22
CLOCKO15516 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.2□□□□□ -2.22
CLOCKO15516 AL391840.1-201ENST00000571144 367 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AC015688.6-201ENST00000577737 104 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 MIR5583-1-201ENST00000580941 59 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AL078604.3-201ENST00000615580 211 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AC008147.4-201ENST00000617570 1204 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 AC005609.4-201ENST00000625071 447 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.2□□□□□ -2.22
CLOCKO15516 MTND5P35-201ENST00000557537 1720 ntBASIC1.2□□□□□ -2.22
CLOCKO15516 RNU6-418P-201ENST00000384035 107 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 MIR1287-201ENST00000408492 90 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.19□□□□□ -2.22
CLOCKO15516 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.19□□□□□ -2.22
CLOCKO15516 CST2P1-201ENST00000425770 87 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.19□□□□□ -2.22
CLOCKO15516 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.19□□□□□ -2.22
CLOCKO15516 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 RNU7-180P-201ENST00000459240 63 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 RNU6-1037P-201ENST00000459571 107 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 AC091435.1-201ENST00000505442 584 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 AC011406.1-201ENST00000512440 370 ntBASIC1.19□□□□□ -2.22
CLOCKO15516 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms