Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AL627311.1-201ENST00000431514 115 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AC243964.1-201ENST00000441814 261 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.35□□□□□ -2.47
CHD1O14646 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.35□□□□□ -2.47
CHD1O14646 AL157871.3-201ENST00000557231 293 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AL929325.1-201ENST00000603096 117 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 AC092634.7-201ENST00000621022 103 ntBASIC-0.35□□□□□ -2.47
CHD1O14646 SNORA42.1-201ENST00000363515 137 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 RNU6-534P-201ENST00000364877 106 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 RPS20P2-201ENST00000402520 389 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 SNORD111-201ENST00000408139 94 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 AC010154.1-201ENST00000425857 269 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 snoU109.2-201ENST00000459316 135 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.36□□□□□ -2.47
CHD1O14646 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.36□□□□□ -2.47
CHD1O14646 SCARNA8-201ENST00000515924 131 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 AC122134.1-202ENST00000569111 1201 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 MIR5695-201ENST00000579717 85 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 MIR8064-201ENST00000612863 90 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.36□□□□□ -2.47
CHD1O14646 SEPT14P17-201ENST00000617978 177 ntBASIC-0.36□□□□□ -2.47
CHD1O14646 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
CHD1O14646 RNU6-701P-201ENST00000384059 107 ntBASIC-0.37□□□□□ -2.47
CHD1O14646 AL034345.1-201ENST00000407768 123 ntBASIC-0.37□□□□□ -2.47
CHD1O14646 RNU6-177P-201ENST00000411257 104 ntBASIC-0.37□□□□□ -2.47
CHD1O14646 BTF3P11-201ENST00000426582 477 ntBASIC-0.37□□□□□ -2.47
CHD1O14646 AC093019.1-201ENST00000443135 252 ntBASIC-0.37□□□□□ -2.47
CHD1O14646 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.37□□□□□ -2.47
CHD1O14646 AC003071.1-201ENST00000451219 789 ntBASIC-0.37□□□□□ -2.47
CHD1O14646 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CHD1O14646 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.37□□□□□ -2.47
CHD1O14646 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.37□□□□□ -2.47
CHD1O14646 SNORA12.2-201ENST00000391040 156 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 RNU6-952P-201ENST00000391164 108 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 snoU13.21-201ENST00000459368 105 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 RPS3AP17-201ENST00000472594 777 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 OR9P1P-201ENST00000496431 281 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.38□□□□□ -2.47
CHD1O14646 MTND1P15-201ENST00000579262 949 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 AL136363.2-201ENST00000604173 851 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 RNU6-505P-201ENST00000384427 107 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 MIR610-201ENST00000385139 96 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 RNU4-27P-201ENST00000410889 139 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.38□□□□□ -2.47
CHD1O14646 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.38□□□□□ -2.47
CHD1O14646 AL122001.1-201ENST00000457027 370 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.38□□□□□ -2.47
CHD1O14646 MTND3P5-201ENST00000512798 333 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 RNU1-86P-201ENST00000516108 154 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 RNU1-107P-201ENST00000516617 154 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 AC253576.2-201ENST00000618815 580 ntBASIC-0.38□□□□□ -2.47
CHD1O14646 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.39□□□□□ -2.47
CHD1O14646 RNY4P16-201ENST00000364768 94 ntBASIC-0.39□□□□□ -2.47
CHD1O14646 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.39□□□□□ -2.47
CHD1O14646 RNU6-142P-201ENST00000384019 107 ntBASIC-0.39□□□□□ -2.47
CHD1O14646 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.39□□□□□ -2.47
CHD1O14646 RPS23P5-201ENST00000495419 428 ntBASIC-0.39□□□□□ -2.47
CHD1O14646 RNU2-12P-201ENST00000517216 168 ntBASIC-0.39□□□□□ -2.47
CHD1O14646 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.39□□□□□ -2.47
CHD1O14646 AC078938.1-201ENST00000620993 318 ntBASIC-0.39□□□□□ -2.47
CHD1O14646 SNORD115-48-201ENST00000364764 76 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.4□□□□□ -2.47
CHD1O14646 RNU6-932P-201ENST00000391108 106 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 SNORA75.2-201ENST00000391138 150 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 SNORA75.3-201ENST00000391231 150 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.4□□□□□ -2.47
CHD1O14646 MTCO2P34-201ENST00000421994 607 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 MTCYBP10-201ENST00000424905 650 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 SEPT7P5-201ENST00000434048 306 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 SEPT7P4-201ENST00000437076 306 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 RPL7P55-201ENST00000450522 746 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 SNORA40.12-201ENST00000516329 111 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 MTND2P7-201ENST00000521337 640 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 MIR4742-201ENST00000581069 85 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 AL162424.1-201ENST00000602325 221 ntBASIC-0.4□□□□□ -2.47
CHD1O14646 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 SNORD56.4-201ENST00000363883 71 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 SNORD31B-201ENST00000364977 69 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.41□□□□□ -2.47
CHD1O14646 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.41□□□□□ -2.47
CHD1O14646 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.41□□□□□ -2.47
CHD1O14646 ART2BP-201ENST00000453501 499 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 RNU7-14P-201ENST00000459331 62 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 AC104136.1-201ENST00000512969 394 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 AC138915.2-201ENST00000569776 97 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 AC174048.1-201ENST00000603389 144 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 DPPA3P3-201ENST00000603842 430 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 AC104695.3-201ENST00000604052 296 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.41□□□□□ -2.47
CHD1O14646 AL031667.3-201ENST00000620124 655 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 AL445264.1-201ENST00000621719 171 ntBASIC-0.41□□□□□ -2.47
CHD1O14646 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 MRPL42P4-201ENST00000453267 443 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 MTCO2P18-201ENST00000457151 658 ntBASIC-0.41□□□□□ -2.48
CHD1O14646 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.41□□□□□ -2.48
CHD1O14646 RNU6-138P-201ENST00000515952 107 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms