Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 EBAG9P1-201ENST00000418955 543 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 USP9YP14-201ENST00000430663 563 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 AL133396.1-201ENST00000432048 687 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.78□□□□□ -2.28
UBFD1O14562 AL031274.1-201ENST00000450334 232 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.78□□□□□ -2.28
UBFD1O14562 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.78□□□□□ -2.28
UBFD1O14562 RNA5SP436-201ENST00000516020 115 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 Vault.3-201ENST00000516676 95 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 DEFB131C-201ENST00000528817 165 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.78□□□□□ -2.28
UBFD1O14562 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.78□□□□□ -2.28
UBFD1O14562 AL512310.8-201ENST00000550183 120 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 MZT1P2-201ENST00000604387 248 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 AC002044.1-201ENST00000606707 158 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 AC008147.4-201ENST00000617570 1204 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 SNORA43.4-201ENST00000629559 138 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
UBFD1O14562 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 RNU1-76P-201ENST00000362903 159 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 SNORA33-201ENST00000363664 130 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 Y_RNA.255-201ENST00000364581 97 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 RNU1-133P-201ENST00000364867 167 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 Y_RNA.504-201ENST00000384481 104 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 MIR1-2-201ENST00000384961 85 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
UBFD1O14562 Y_RNA.598-201ENST00000410480 95 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.77□□□□□ -2.29
UBFD1O14562 FTH1P12-201ENST00000432137 551 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 PRPS1P1-201ENST00000445305 876 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 C1DP4-201ENST00000455429 424 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 RPS29P15-201ENST00000458329 171 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
UBFD1O14562 RNA5SP404-201ENST00000517118 132 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 SNORA25.17-201ENST00000517184 124 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 AC109479.2-201ENST00000517842 174 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 AL442163.3-201ENST00000554110 156 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 AC090517.1-201ENST00000569307 266 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 MIR4742-201ENST00000581069 85 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 Z99289.3-201ENST00000605586 594 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 AC004492.1-201ENST00000607036 742 ntBASIC0.77□□□□□ -2.29
UBFD1O14562 RNU4-56P-201ENST00000364700 142 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 RNU6-1029P-201ENST00000384109 107 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 SNORA16.2-201ENST00000390991 127 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 SNORD70.1-201ENST00000391007 85 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 RNU11-5P-201ENST00000391216 129 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 RPS3AP3-201ENST00000411933 242 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 MTCO2P34-201ENST00000421994 607 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.76□□□□□ -2.29
UBFD1O14562 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.76□□□□□ -2.29
UBFD1O14562 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.76□□□□□ -2.29
UBFD1O14562 AC007395.1-201ENST00000451333 677 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 RPL31P3-201ENST00000458430 332 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 snoU13.27-201ENST00000459278 104 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.76□□□□□ -2.29
UBFD1O14562 AK3P2-201ENST00000507976 429 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 AC011406.1-201ENST00000512440 370 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 LRRC34P2-201ENST00000514850 553 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 RNU2-69P-201ENST00000516061 100 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 RNA5SP481-201ENST00000516814 122 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 SNORD60.2-201ENST00000516883 86 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.76□□□□□ -2.29
UBFD1O14562 AGGF1P4-201ENST00000568249 801 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 AC008945.2-201ENST00000606056 604 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 AC009994.1-201ENST00000606889 253 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.76□□□□□ -2.29
UBFD1O14562 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.76□□□□□ -2.29
UBFD1O14562 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
UBFD1O14562 AC092268.1-201ENST00000342691 405 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 SNORD33-201ENST00000362761 85 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 RNU6-393P-201ENST00000384475 107 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 MIR454-201ENST00000390180 115 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 MIR208B-201ENST00000401172 77 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.75□□□□□ -2.29
UBFD1O14562 MTCO1P21-201ENST00000416634 589 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.75□□□□□ -2.29
UBFD1O14562 HSFY7P-201ENST00000432672 318 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AL596276.1-201ENST00000434465 418 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 HSFY8P-201ENST00000437934 318 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 RPS23P5-201ENST00000495419 428 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC008628.2-201ENST00000502605 298 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.75□□□□□ -2.29
UBFD1O14562 UBL5P1-201ENST00000507979 193 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 SNORD27.1-201ENST00000516319 72 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 RNU6-856P-201ENST00000516959 98 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 RAB11AP2-201ENST00000545905 639 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.75□□□□□ -2.29
UBFD1O14562 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.75□□□□□ -2.29
UBFD1O14562 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.75□□□□□ -2.29
UBFD1O14562 CYP4A27P-201ENST00000567218 190 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.75□□□□□ -2.29
UBFD1O14562 AC091805.2-201ENST00000603848 235 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AP001836.1-201ENST00000604675 523 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AC064872.1-201ENST00000604823 1072 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 Z84480.1-201ENST00000605131 311 ntBASIC0.75□□□□□ -2.29
UBFD1O14562 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.75□□□□□ -2.29
UBFD1O14562 AC008250.2-201ENST00000615261 205 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms