Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-505P-201ENST00000384427 107 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-114P-201ENST00000384704 105 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 SNORA75.2-201ENST00000391138 150 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 SNORA75.3-201ENST00000391231 150 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-77P-201ENST00000410554 91 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC013262.1-201ENST00000426710 252 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AL008629.1-201ENST00000438615 184 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 MTATP6P30-201ENST00000443540 664 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC098869.1-201ENST00000481627 292 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-947P-201ENST00000516264 106 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC022868.1-201ENST00000517767 391 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 BNIP3P6-201ENST00000549284 499 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC060771.1-201ENST00000582031 164 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC090330.1-201ENST00000588646 764 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AP002906.1-201ENST00000603405 233 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AL358072.1-201ENST00000604156 575 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC136475.10-201ENST00000620253 385 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC078938.1-201ENST00000620993 318 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AL079343.1-201ENST00000572358 1771 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-950P-201ENST00000384651 107 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 RNU6-735P-201ENST00000410612 107 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 MTCO3P29-201ENST00000432119 779 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 ELOCP30-201ENST00000447108 299 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC003071.1-201ENST00000451219 789 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 snoU13.14-201ENST00000459372 104 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 RNU7-34P-201ENST00000459394 64 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC026410.2-201ENST00000460281 156 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 HMGB1P29-201ENST00000505659 499 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 SNORA31.19-201ENST00000517079 126 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC091163.3-201ENST00000518269 1144 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC109810.1-201ENST00000534066 224 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 MIR1273C-201ENST00000578669 77 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 MIR5695-201ENST00000579717 85 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 MIR4742-201ENST00000581069 85 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC078795.2-201ENST00000602835 1252 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AL356157.2-201ENST00000605122 111 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 MIR18A-201ENST00000362310 71 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 RNU6-655P-201ENST00000362858 107 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 RNA5SP111-201ENST00000411386 101 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC005094.1-201ENST00000440420 368 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC002542.1-201ENST00000440683 193 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC130509.1-201ENST00000464158 433 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 SUB1P2-201ENST00000556401 297 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 BNIP3P30-201ENST00000601184 574 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AL391001.1-201ENST00000602747 715 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.06□□□□□ -2.42
CACNA1AO00555 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.06□□□□□ -2.42
CACNA1AO00555 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC083799.1-201ENST00000366451 910 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 RNU6-331P-201ENST00000384724 107 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 CBX3P9-201ENST00000402326 552 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 SNORD71-201ENST00000411292 86 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC068533.2-201ENST00000411872 306 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 MTND1P28-201ENST00000435623 950 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC233266.1-201ENST00000454518 96 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 RPS29P15-201ENST00000458329 171 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC104563.1-201ENST00000476147 376 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
CACNA1AO00555 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL357312.1-201ENST00000603879 298 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC242852.1-201ENST00000612151 96 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC244015.1-201ENST00000622301 99 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC092656.1-203ENST00000624134 423 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AC099654.9-201ENST00000637055 678 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 AL390237.1-201ENST00000404226 1415 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 SNORD116-20-201ENST00000384529 92 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 MIR520F-201ENST00000384824 87 ntBASIC-0.07□□□□□ -2.42
CACNA1AO00555 MIR301A-201ENST00000385261 86 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms