Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.34□□□□□ -2.46
HMGN4O00479 STAG3L5P-204ENST00000443759 179 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 SEPT14P24-201ENST00000447236 180 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.34□□□□□ -2.46
HMGN4O00479 ZNF886P-201ENST00000450781 723 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 LINC01399-202ENST00000458450 244 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.34□□□□□ -2.46
HMGN4O00479 MTCO3P9-201ENST00000506989 781 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 AC109445.1-201ENST00000512356 383 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 SNORA40.12-201ENST00000516329 111 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 AC112693.2-201ENST00000556538 232 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 MIR4778-201ENST00000577635 80 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 AC234772.3-201ENST00000602277 528 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 RPL17P51-201ENST00000605218 238 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 AC124016.2-201ENST00000610058 665 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 AC131159.1-201ENST00000621854 213 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 AC231657.1-201ENST00000624313 397 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
HMGN4O00479 RNU6-853P-201ENST00000364306 107 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 MIR573-201ENST00000384964 99 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 MIR644A-201ENST00000385262 94 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 AL356583.2-201ENST00000426536 280 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.35□□□□□ -2.47
HMGN4O00479 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 RNA5SP330-201ENST00000517096 96 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 DEFB108A-201ENST00000530110 222 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 ZNF321P-202ENST00000550843 495 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 AC022217.4-201ENST00000604389 163 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 AL450270.1-201ENST00000606160 391 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 AC064807.4-201ENST00000607201 407 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 RNU6-94P-201ENST00000607728 107 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 AC024940.5-201ENST00000622889 474 ntBASIC-0.35□□□□□ -2.47
HMGN4O00479 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 U8.7-201ENST00000364940 136 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 RNU6-716P-201ENST00000365621 103 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 RNU6-278P-201ENST00000390945 109 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 RN7SKP266-201ENST00000410232 287 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 MTATP6P16-201ENST00000434543 526 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 SEPT7P4-201ENST00000437076 306 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.36□□□□□ -2.47
HMGN4O00479 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.36□□□□□ -2.47
HMGN4O00479 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
HMGN4O00479 ELOCP24-201ENST00000456370 334 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC093899.1-201ENST00000457984 376 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 TPT1P7-201ENST00000458300 517 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC119751.4-201ENST00000507498 357 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.36□□□□□ -2.47
HMGN4O00479 AC074133.1-201ENST00000515696 183 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC021451.1-201ENST00000523498 1129 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AF235103.2-201ENST00000525753 346 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.36□□□□□ -2.47
HMGN4O00479 MIR3146-201ENST00000580367 79 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.36□□□□□ -2.47
HMGN4O00479 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.36□□□□□ -2.47
HMGN4O00479 AC090186.1-201ENST00000605991 572 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC007014.2-201ENST00000615581 479 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 uc_338.34-201ENST00000617467 174 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.36□□□□□ -2.47
HMGN4O00479 RMST_7.1-201ENST00000621935 268 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC067863.3-201ENST00000624172 122 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 MIR6079-201ENST00000635807 62 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 AC099654.8-201ENST00000637757 681 ntBASIC-0.36□□□□□ -2.47
HMGN4O00479 RNU5B-1-201ENST00000363286 116 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 RNA5SP517-201ENST00000364724 117 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 RNU6-440P-201ENST00000390882 105 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC007283.2-201ENST00000424739 197 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 MTCO1P3-201ENST00000429327 192 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 RPS25P9-201ENST00000435591 252 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC093019.1-201ENST00000443135 252 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 MTCO2P7-201ENST00000446518 666 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.37□□□□□ -2.47
HMGN4O00479 AC007547.1-201ENST00000462177 490 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC010469.2-201ENST00000496412 480 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.37□□□□□ -2.47
HMGN4O00479 RBBP4P6-201ENST00000508098 202 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC104136.1-201ENST00000512969 394 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC112206.3-201ENST00000514578 389 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 RNU6-150P-201ENST00000516237 95 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC174048.1-201ENST00000603389 144 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.37□□□□□ -2.47
HMGN4O00479 AP000484.1-201ENST00000620067 1252 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 AC006927.4-201ENST00000639187 543 ntBASIC-0.37□□□□□ -2.47
HMGN4O00479 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.37□□□□□ -2.47
HMGN4O00479 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 SMIM11P1-201ENST00000369586 178 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 RNA5SP467-201ENST00000391274 118 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
HMGN4O00479 RNU6-994P-201ENST00000410507 111 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 RNU6-57P-201ENST00000411348 103 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 MTND4LP16-201ENST00000440828 295 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.38□□□□□ -2.47
HMGN4O00479 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.38□□□□□ -2.47
HMGN4O00479 RPS23P5-201ENST00000495419 428 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.38□□□□□ -2.47
HMGN4O00479 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.38□□□□□ -2.47
HMGN4O00479 U6.42-201ENST00000618440 107 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms