Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.74□□□□□ -2.13
SLC28A1O00337 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.73□□□□□ -2.13
SLC28A1O00337 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SLC28A1O00337 MIR340-201ENST00000362125 95 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 Y_RNA.100-201ENST00000363141 102 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 RNU6-784P-201ENST00000384330 106 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 RNU6-790P-201ENST00000384479 105 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 RNU6-332P-201ENST00000391193 108 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 MTCO1P21-201ENST00000416634 589 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC28A1O00337 MTCO3P18-201ENST00000440206 761 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
SLC28A1O00337 AC007395.1-201ENST00000451333 677 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC28A1O00337 RNU7-187P-201ENST00000458985 68 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 TRBV12-1-201ENST00000479785 344 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 AC091544.4-201ENST00000555268 342 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
SLC28A1O00337 MIR4513-201ENST00000581077 86 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 MIR3976-201ENST00000606807 139 ntBASIC1.73□□□□□ -2.13
SLC28A1O00337 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC28A1O00337 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SLC28A1O00337 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SLC28A1O00337 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SLC28A1O00337 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC28A1O00337 RNU6-562P-201ENST00000362731 107 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 Y_RNA.132-201ENST00000363421 102 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 RNU6-373P-201ENST00000411247 98 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC28A1O00337 SNORA59A-201ENST00000459326 152 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 RNU7-66P-201ENST00000459469 62 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 FAM206BP-201ENST00000510179 541 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.72□□□□□ -2.13
SLC28A1O00337 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 SUMO2P18-201ENST00000518873 252 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC28A1O00337 DEFB131C-201ENST00000528817 165 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 AC016727.2-201ENST00000603988 621 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 AC024614.3-201ENST00000637860 256 ntBASIC1.72□□□□□ -2.13
SLC28A1O00337 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.13
SLC28A1O00337 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
SLC28A1O00337 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.71□□□□□ -2.14
SLC28A1O00337 Y_RNA.3-201ENST00000362331 103 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 RNY4P14-201ENST00000363656 96 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 SNORD116-4-201ENST00000384733 96 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 MIR300-201ENST00000401138 83 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 ZNF885P-201ENST00000420174 1098 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 NCOR1P3-201ENST00000420479 303 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.71□□□□□ -2.14
SLC28A1O00337 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.71□□□□□ -2.14
SLC28A1O00337 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.71□□□□□ -2.14
SLC28A1O00337 AL353572.1-201ENST00000442490 417 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 AL513124.1-201ENST00000450410 614 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 OR2AQ1P-201ENST00000451972 200 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 PCMTD1P1-201ENST00000455560 355 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 AF186996.7-201ENST00000492781 209 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.71□□□□□ -2.14
SLC28A1O00337 RNU6-256P-201ENST00000516747 97 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 GNAI2P1-201ENST00000541815 315 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 TPRKBP2-201ENST00000565969 475 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.71□□□□□ -2.14
SLC28A1O00337 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 AL138726.1-201ENST00000614873 333 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 AC137590.2-201ENST00000619709 240 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.71□□□□□ -2.14
SLC28A1O00337 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SLC28A1O00337 RNU6-545P-201ENST00000362681 104 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 RNU4-12P-201ENST00000365233 139 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 Y_RNA.414-201ENST00000384011 101 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 Y_RNA.450-201ENST00000384198 113 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 SNORA70B-201ENST00000384210 135 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 Y_RNA.554-201ENST00000384672 102 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 RNU6-95P-201ENST00000384697 107 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 AC010531.2-201ENST00000465012 153 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 AC087477.1-201ENST00000465747 340 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
SLC28A1O00337 HMGB3P17-201ENST00000504195 649 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 YWHAEP4-201ENST00000505390 198 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 AC097473.1-201ENST00000508142 408 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 MTND1P5-201ENST00000517906 940 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.7□□□□□ -2.14
SLC28A1O00337 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.7□□□□□ -2.14
SLC28A1O00337 AC023043.2-201ENST00000589678 1026 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SLC28A1O00337 AC083806.3-201ENST00000614016 455 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.7□□□□□ -2.14
SLC28A1O00337 TCL6_2.1-201ENST00000615162 119 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 U4.5-201ENST00000617137 123 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 AC022513.1-201ENST00000624512 117 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 AL359697.1-201ENST00000624879 587 ntBASIC1.7□□□□□ -2.14
SLC28A1O00337 AL159152.1-201ENST00000635019 2587 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.69□□□□□ -2.14
SLC28A1O00337 Y_RNA.151-201ENST00000363566 112 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 RNU6-877P-201ENST00000383868 107 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 Y_RNA.573-201ENST00000384763 105 ntBASIC1.69□□□□□ -2.14
SLC28A1O00337 AL590632.1-201ENST00000424289 371 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms