Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HMGN2P3-201ENST00000433603 273 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 USP9YP28-201ENST00000435142 589 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 HMGN2P5-201ENST00000436882 273 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.73□□□□□ -2.13
PDLIM1O00151 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.73□□□□□ -2.13
PDLIM1O00151 RNU7-187P-201ENST00000458985 68 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 snoU13.26-201ENST00000459452 105 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 YWHAEP4-201ENST00000505390 198 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 FAM206BP-201ENST00000510179 541 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 AC005741.1-201ENST00000511094 432 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 RNU5F-4P-201ENST00000516581 114 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 RNU6-256P-201ENST00000516747 97 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 MTND1P5-201ENST00000517906 940 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.73□□□□□ -2.13
PDLIM1O00151 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.73□□□□□ -2.13
PDLIM1O00151 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.73□□□□□ -2.13
PDLIM1O00151 AC090517.1-201ENST00000569307 266 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 CPDP1-201ENST00000579660 283 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.73□□□□□ -2.13
PDLIM1O00151 AC068790.6-201ENST00000602558 258 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 MIR3976-201ENST00000606807 139 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 AC009318.2-201ENST00000610917 651 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 AC130454.1-201ENST00000622948 401 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 AC068137.4-201ENST00000638485 296 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.72□□□□□ -2.13
PDLIM1O00151 Y_RNA.99-201ENST00000363138 105 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 Y_RNA.151-201ENST00000363566 112 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 Y_RNA.414-201ENST00000384011 101 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 RNU6-968P-201ENST00000384076 107 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.72□□□□□ -2.13
PDLIM1O00151 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM1O00151 AL645568.3-201ENST00000433683 316 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.72□□□□□ -2.13
PDLIM1O00151 AL353572.1-201ENST00000442490 417 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM1O00151 PCMTD1P1-201ENST00000455560 355 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 RNU1-98P-201ENST00000458992 160 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 RNU7-14P-201ENST00000459331 62 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 RNA5SP57-201ENST00000459463 123 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM1O00151 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PDLIM1O00151 MRPS36P4-201ENST00000534436 298 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM1O00151 AC016256.1-201ENST00000547971 354 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 MIR3672-201ENST00000584290 82 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 AC023043.2-201ENST00000589678 1026 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
PDLIM1O00151 AC009033.1-201ENST00000624279 431 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 AC090617.10-201ENST00000624308 134 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 MIR3688-2-201ENST00000636963 87 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 MIR3662-201ENST00000637030 95 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 AC027514.1-201ENST00000588561 1603 ntBASIC1.72□□□□□ -2.13
PDLIM1O00151 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
PDLIM1O00151 RNU1-58P-201ENST00000362413 163 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 RNU6-562P-201ENST00000362731 107 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 RNU6-1164P-201ENST00000364428 107 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 RNU6-534P-201ENST00000364877 106 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 RNU6-1286P-201ENST00000383871 107 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 RNA5SP465-201ENST00000391195 109 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 AL033519.2-201ENST00000403958 392 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.71□□□□□ -2.14
PDLIM1O00151 Z82205.1-201ENST00000428456 297 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 MTND2P29-201ENST00000438595 412 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 MTCO3P18-201ENST00000440206 761 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 FTH1P25-201ENST00000447665 469 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 RPS23P5-201ENST00000495419 428 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 MTCYBP18-201ENST00000501056 747 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 RNU6-273P-201ENST00000516937 96 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.71□□□□□ -2.14
PDLIM1O00151 FGF7P1-201ENST00000582820 288 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PDLIM1O00151 AC005520.5-201ENST00000613926 164 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 AL138726.1-201ENST00000614873 333 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 U1.36-201ENST00000620684 176 ntBASIC1.71□□□□□ -2.14
PDLIM1O00151 AC233981.2-201ENST00000611524 1614 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 SNORA32.2-201ENST00000384049 122 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 RNU6-160P-201ENST00000384591 107 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 RNU6-95P-201ENST00000384697 107 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 MIR597-201ENST00000384968 97 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 U8.13-201ENST00000390842 128 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 RNA5SP118-201ENST00000410385 109 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 AL590632.1-201ENST00000424289 371 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 UBE2V1P8-201ENST00000437166 265 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 SNRPEP8-201ENST00000442866 260 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.7□□□□□ -2.14
PDLIM1O00151 RNA5SP182-201ENST00000516064 82 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 RNU6-1098P-201ENST00000516772 96 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 AP005639.2-201ENST00000527592 928 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.7□□□□□ -2.14
PDLIM1O00151 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.7□□□□□ -2.14
PDLIM1O00151 CYP2C61P-201ENST00000604072 290 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 AC009994.1-201ENST00000606889 253 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.7□□□□□ -2.14
PDLIM1O00151 AL133215.3-201ENST00000609801 448 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 AC093913.1-201ENST00000614178 329 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms