Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU6-216P-201ENST00000363282 104 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 RNA5SP325-201ENST00000363756 130 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 SNORD56.4-201ENST00000363883 71 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 MIR106A-201ENST00000384870 81 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 RN7SKP200-201ENST00000410564 320 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC096531.1-201ENST00000419107 107 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 PDCL2P1-201ENST00000419302 352 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AL590632.1-201ENST00000424289 371 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 MED13P1-201ENST00000428342 171 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC007969.2-201ENST00000441891 191 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 MRPL42P4-201ENST00000453267 443 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 RNU7-140P-201ENST00000459546 60 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC104692.1-201ENST00000472406 90 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 RN7SKP287-201ENST00000516546 266 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 SNORA43.2-201ENST00000516652 128 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC024995.1-201ENST00000523014 93 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 MIR4293-201ENST00000584305 78 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 MTND3P19-201ENST00000603825 345 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 RBM11P1-201ENST00000604951 799 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 MIR6755-201ENST00000619993 66 ntBASIC-0.47□□□□□ -2.48
CPSF4LA6NMK7 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 SNORD56.1-201ENST00000362913 68 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 SNORA4.3-201ENST00000365564 137 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 RNU6-679P-201ENST00000391003 106 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 RNA5SP467-201ENST00000391274 118 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 MTCYBP2-201ENST00000407745 171 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 SNORD111-201ENST00000408139 94 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 MRPS10P2-201ENST00000431226 381 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AC093019.1-201ENST00000443135 252 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 RPL18AP17-201ENST00000455326 198 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 RNU7-14P-201ENST00000459331 62 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 HMGN2P26-201ENST00000463169 339 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 HMGN1P10-201ENST00000474557 553 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AK6P2-201ENST00000549020 471 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AC138915.2-201ENST00000569776 97 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AC110760.3-201ENST00000598794 467 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 AL606834.3-201ENST00000602615 496 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 RMST_10.1-201ENST00000616309 154 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 U6.108-201ENST00000637764 58 ntBASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.48□□□□□ -2.49
CPSF4LA6NMK7 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 RNU1-76P-201ENST00000362903 159 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 SNORA2A-201ENST00000383885 135 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 MIR643-201ENST00000385267 97 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 TPTE2P1-204ENST00000435256 593 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 MTCYBP39-201ENST00000437562 491 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 MTND4P15-201ENST00000437913 1033 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AC113347.3-201ENST00000509113 148 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AC025465.4-201ENST00000513422 638 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 LRRC6P1-201ENST00000532188 885 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 MIR3146-201ENST00000580367 79 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 MIR4300-201ENST00000581016 96 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AC122133.1-201ENST00000613964 233 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 AC010975.3-201ENST00000618727 978 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 SCARNA4-202ENST00000625402 129 ntBASIC-0.49□□□□□ -2.49
CPSF4LA6NMK7 SNORA18.1-201ENST00000363418 128 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 RNU6-833P-201ENST00000363486 107 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 SMIM11P1-201ENST00000369586 178 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 RPS20P2-201ENST00000402520 389 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 RNA5SP201-201ENST00000410316 124 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 AC007283.2-201ENST00000424739 197 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 RNU7-136P-201ENST00000458819 69 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 AL163973.1-201ENST00000484753 577 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 RNU6-760P-201ENST00000516078 97 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 RN7SKP164-201ENST00000516138 266 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 MIR1273C-201ENST00000578669 77 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 AC006157.1-201ENST00000611750 366 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 AC011155.2-201ENST00000623202 216 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 AC120349.2-201ENST00000625002 298 ntBASIC-0.5□□□□□ -2.49
CPSF4LA6NMK7 RNU6-353P-201ENST00000364266 108 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 RNU6-418P-201ENST00000384035 107 ntBASIC-0.51□□□□□ -2.49
CPSF4LA6NMK7 RNU6-925P-201ENST00000384629 104 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms