Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 RNU6-377P-201ENST00000515965 102 ntBASIC0.44□□□□□ -2.34
RTL1A6NKG5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.44□□□□□ -2.34
RTL1A6NKG5 AC242498.1-201ENST00000604134 111 ntBASIC0.44□□□□□ -2.34
RTL1A6NKG5 AC243994.1-201ENST00000618627 109 ntBASIC0.44□□□□□ -2.34
RTL1A6NKG5 AC134026.1-201ENST00000623249 2239 ntBASIC0.44□□□□□ -2.34
RTL1A6NKG5 AL391994.1-201ENST00000254724 282 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
RTL1A6NKG5 Y_RNA.110-201ENST00000363220 99 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 Y_RNA.178-201ENST00000363832 102 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 RNU6-534P-201ENST00000364877 106 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
RTL1A6NKG5 AF228730.1-201ENST00000397972 663 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.43□□□□□ -2.34
RTL1A6NKG5 MTND1P32-201ENST00000433043 938 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 MTCO3P18-201ENST00000440206 761 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.43□□□□□ -2.34
RTL1A6NKG5 MTCO3P7-201ENST00000510008 774 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 RNU6-276P-201ENST00000516114 96 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.43□□□□□ -2.34
RTL1A6NKG5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.43□□□□□ -2.34
RTL1A6NKG5 AC090517.1-201ENST00000569307 266 ntBASIC0.43□□□□□ -2.34
RTL1A6NKG5 AC073544.1-201ENST00000600110 1595 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 SNORA33-201ENST00000363664 130 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU6-25P-201ENST00000383873 107 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU6-969P-201ENST00000383900 105 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU6-48P-201ENST00000384161 107 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 SNORA24.1-201ENST00000384401 135 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU6-15P-201ENST00000384534 107 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU6-29P-201ENST00000384637 107 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNA5SP109-201ENST00000391010 116 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU2-3P-201ENST00000410144 191 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 AC000111.3-201ENST00000433478 193 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 AC007547.1-201ENST00000462177 490 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU6-947P-201ENST00000516264 106 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 RNU6-922P-201ENST00000516753 99 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 MIR5695-201ENST00000579717 85 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 AC078795.3-201ENST00000602913 472 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 AL031281.1-201ENST00000604049 488 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 AL353149.1-201ENST00000610667 244 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.42□□□□□ -2.34
RTL1A6NKG5 AL157786.1-207ENST00000627771 695 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 AC106858.1-201ENST00000637497 429 ntBASIC0.42□□□□□ -2.34
RTL1A6NKG5 BX322639.1-202ENST00000423987 2213 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 RNU4-67P-201ENST00000364569 141 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 RNU6-110P-201ENST00000384508 104 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.41□□□□□ -2.34
RTL1A6NKG5 AC078809.1-201ENST00000427601 140 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 RPS26P48-201ENST00000491713 339 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 AC105758.1-201ENST00000506038 399 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 MTATP6P15-201ENST00000527233 835 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 AC008521.1-201ENST00000587471 187 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 AC073539.2-201ENST00000597113 165 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 MTND3P19-201ENST00000603825 345 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 AL513534.2-201ENST00000603836 250 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 AL592221.1-201ENST00000605266 382 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 AL021368.1-201ENST00000607490 540 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 AC106754.2-201ENST00000623006 233 ntBASIC0.41□□□□□ -2.34
RTL1A6NKG5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
RTL1A6NKG5 RNU1-76P-201ENST00000362903 159 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 U3.8-201ENST00000363675 217 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 SNORA72.2-201ENST00000365028 127 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 Y_RNA.433-201ENST00000384089 102 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.4□□□□□ -2.35
RTL1A6NKG5 MTCYBP1-201ENST00000454315 1119 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
RTL1A6NKG5 AC022616.6-201ENST00000520479 119 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.4□□□□□ -2.35
RTL1A6NKG5 AL353765.1-201ENST00000605514 183 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.4□□□□□ -2.35
RTL1A6NKG5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.4□□□□□ -2.35
RTL1A6NKG5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
RTL1A6NKG5 SNORA80D-201ENST00000384488 135 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 RNU6-607P-201ENST00000411283 108 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 USP9YP28-201ENST00000435142 589 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 GAPDHP17-201ENST00000449858 1001 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 MTND1P12-201ENST00000455231 147 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 RNA5SP337-201ENST00000517007 109 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 APOOP3-201ENST00000536787 586 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.39□□□□□ -2.35
RTL1A6NKG5 TMF1P1-201ENST00000576058 373 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 AC080013.3-201ENST00000606839 578 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 GHRLOS.1-201ENST00000610995 70 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 AC009509.4-201ENST00000619202 509 ntBASIC0.39□□□□□ -2.35
RTL1A6NKG5 RNU6-428P-201ENST00000362942 107 ntBASIC0.38□□□□□ -2.35
RTL1A6NKG5 RNU6-39P-201ENST00000384344 107 ntBASIC0.38□□□□□ -2.35
RTL1A6NKG5 RNU6-1031P-201ENST00000384773 107 ntBASIC0.38□□□□□ -2.35
RTL1A6NKG5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.38□□□□□ -2.35
RTL1A6NKG5 RPL22P17-201ENST00000438729 315 ntBASIC0.38□□□□□ -2.35
RTL1A6NKG5 EEF1A1P39-201ENST00000440791 250 ntBASIC0.38□□□□□ -2.35
RTL1A6NKG5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms