Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AC099654.10-201ENST00000640395 161 ntBASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TRIM43BA6NCK2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.39-201ENST00000362620 98 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.132-201ENST00000363421 102 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 SNORD88.1-201ENST00000408684 91 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.605-201ENST00000410577 105 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 UBBP3-201ENST00000445497 241 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 RNU6-991P-201ENST00000516168 107 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 RNU6-826P-201ENST00000516827 104 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 MIR4648-201ENST00000580107 72 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AC092447.9-201ENST00000603395 144 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AC069294.1-201ENST00000608397 350 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
TRIM43BA6NCK2 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.326-201ENST00000365176 113 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 SNORA22B-201ENST00000383876 138 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 MIR208B-201ENST00000401172 77 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 U6atac.2-201ENST00000408644 118 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 RNA5SP425-201ENST00000410336 112 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 MCFD2P1-201ENST00000417812 300 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 OR2AQ1P-201ENST00000451972 200 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AP004217.1-201ENST00000480579 346 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 RNA5SP320-201ENST00000516263 124 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC091144.1-201ENST00000519573 138 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC105245.1-201ENST00000581934 244 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC016925.2-201ENST00000605108 242 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AL138963.2-201ENST00000605137 226 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AL355802.3-201ENST00000607571 545 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC091925.1-201ENST00000623204 462 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 AC090517.3-201ENST00000625170 141 ntBASIC2.91□□□□□ -1.94
TRIM43BA6NCK2 snoU2_19.1-201ENST00000362361 80 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.216-201ENST00000364205 93 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.364-201ENST00000365532 101 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 AC117470.1-201ENST00000381974 330 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RNU6-17P-201ENST00000384245 107 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RNY1P14-201ENST00000384426 108 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.496-201ENST00000384444 101 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RNU6-18P-201ENST00000384527 107 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RNU6-541P-201ENST00000384709 110 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 SNORA69.1-201ENST00000390904 137 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 FO393413.1-201ENST00000402892 195 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RN7SKP223-201ENST00000410582 62 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RPS26P42-201ENST00000413485 326 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RPS15AP7-201ENST00000439294 405 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 MTND4P19-201ENST00000446659 478 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RNU7-87P-201ENST00000459343 62 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RPL23AP70-201ENST00000483361 460 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 RNA5SP282-201ENST00000516355 108 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 DEFB122-202ENST00000569013 197 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 AL138825.1-201ENST00000618587 192 ntBASIC2.9□□□□□ -1.95
TRIM43BA6NCK2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 MIR29B2-201ENST00000385055 81 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 RNU2-25P-201ENST00000411041 191 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 AC003982.1-202ENST00000469928 248 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 AC108210.2-201ENST00000503681 201 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 SNORA25.10-201ENST00000515926 124 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 RNU6-1198P-201ENST00000516904 67 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 AC007485.1-201ENST00000616755 206 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 AC069528.2-201ENST00000624849 1991 ntBASIC2.89□□□□□ -1.95
TRIM43BA6NCK2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.106-201ENST00000363189 100 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.148-201ENST00000363557 117 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 RNU4-42P-201ENST00000364738 142 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 SNORA33.2-201ENST00000365413 134 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 Y_RNA.422-201ENST00000384054 114 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 MIR628-201ENST00000385229 95 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 RNU6-1093P-201ENST00000391194 107 ntBASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM43BA6NCK2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms