Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 GPR143P-201ENST00000434155 205 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AC079382.1-201ENST00000493346 557 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AC008628.2-201ENST00000502605 298 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 Y_RNA.676-201ENST00000516393 96 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 RNA5SP503-201ENST00000517047 117 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 CYCSP23-201ENST00000519781 313 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AL022345.2-201ENST00000606307 135 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 MIR6504-201ENST00000613520 61 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AC008250.2-201ENST00000615261 205 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AL603839.4-201ENST00000624658 1005 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 MIR338-201ENST00000636369 67 ntBASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV41A0A0B4J266 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 RNU4-46P-201ENST00000410818 138 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC079781.2-201ENST00000446424 169 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 HSFY5P-201ENST00000453726 309 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 snoU13.6-201ENST00000458785 104 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 RNU7-182P-201ENST00000459009 62 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 RPS23P5-201ENST00000495419 428 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC005178.1-201ENST00000508392 440 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC067942.3-201ENST00000512025 362 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 RNU6-165P-201ENST00000517170 99 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 MTCO3P23-201ENST00000561363 289 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 MIR4703-201ENST00000577728 79 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 MIR3664-201ENST00000579074 99 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC136443.5-201ENST00000603741 370 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC211469.2-201ENST00000605461 205 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AL020996.3-201ENST00000606617 222 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC009509.4-201ENST00000619202 509 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 7SK.13-201ENST00000622040 250 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 AC068647.2-201ENST00000637380 353 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 MTND4P4-201ENST00000439033 1366 ntBASIC0.67□□□□□ -2.3
TRAV41A0A0B4J266 BX322639.1-202ENST00000423987 2213 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 SNORD114-2-201ENST00000363953 78 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 Y_RNA.191-201ENST00000363972 113 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 RNU1-93P-201ENST00000364704 169 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 RNU6-108P-201ENST00000365558 107 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 HMGN1P14-201ENST00000412459 517 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 MTATP6P19-201ENST00000413797 659 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 AC012306.1-201ENST00000423267 114 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 AC002486.1-201ENST00000435098 391 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 AC016717.1-201ENST00000448918 286 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 SNORD11.1-201ENST00000459482 85 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 MTND2P32-201ENST00000521584 1038 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 AC109446.2-201ENST00000567872 497 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 TMF1P1-201ENST00000576058 373 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 MIR4709-201ENST00000577272 72 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 MIR3973-201ENST00000579824 107 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 FAM71BP1-201ENST00000604431 523 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 AC040896.1-201ENST00000613819 479 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 SEPT14P19-203ENST00000633205 211 ntBASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV41A0A0B4J266 Y_RNA.132-201ENST00000363421 102 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-534P-201ENST00000364877 106 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 Y_RNA.480-201ENST00000384364 102 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-434P-201ENST00000384376 107 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 MIR1283-1-201ENST00000408494 87 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-584P-201ENST00000410350 95 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 COX6CP10-201ENST00000416832 224 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC069257.2-201ENST00000441819 155 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC010486.2-201ENST00000505572 483 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 RPL39P5-202ENST00000512505 151 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-567P-201ENST00000516746 107 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 TPRKBP2-201ENST00000565969 475 ntBASIC0.65□□□□□ -2.31
TRAV41A0A0B4J266 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms