Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-413P-201ENST00000384115 107 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-950P-201ENST00000384651 107 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AL136310.1-201ENST00000404926 654 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC002486.1-201ENST00000435098 391 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC073910.1-201ENST00000445047 438 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 ZNF321P-202ENST00000550843 495 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 MIR548AC-201ENST00000585049 88 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC112187.2-201ENST00000604345 283 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 CTHRC1P1-201ENST00000605383 469 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AL139286.2-201ENST00000606838 396 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC104073.3-201ENST00000610942 955 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC136475.10-201ENST00000620253 385 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AC126544.2-201ENST00000625174 749 ntBASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.48□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-222P-201ENST00000362438 107 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 snoU2-30.2-201ENST00000362805 70 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-25P-201ENST00000383873 107 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 Y_RNA.390-201ENST00000383932 102 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-48P-201ENST00000384161 107 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-15P-201ENST00000384534 107 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 RNU6-29P-201ENST00000384637 107 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 SNORA26.3-201ENST00000391119 136 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 RPL23AP95-201ENST00000426806 265 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 USP9YP14-201ENST00000430663 563 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 SNORA31.2-201ENST00000516019 134 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 SNORD79.1-201ENST00000516069 84 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 SNRPGP20-201ENST00000604477 205 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 AC105148.1-201ENST00000604961 409 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 AC108747.1-201ENST00000609508 535 ntBASIC0.47□□□□□ -2.33
SCN10AQ9Y5Y9 Y_RNA.324-201ENST00000365165 102 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 Y_RNA.465-201ENST00000384293 102 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-110P-201ENST00000384508 104 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AL360271.2-201ENST00000447710 161 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AC105758.1-201ENST00000506038 399 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 RNU1-86P-201ENST00000516108 154 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 RNU1-107P-201ENST00000516617 154 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AC123904.2-201ENST00000548059 300 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 SNORD3E-202ENST00000627253 216 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-769P-201ENST00000384407 104 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 MIR558-201ENST00000384920 94 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 GAPDHP17-201ENST00000449858 1001 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 snoU109.3-201ENST00000459477 145 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 PDCD5P2-201ENST00000507570 312 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AL590705.4-201ENST00000532209 134 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 MIR5697-201ENST00000578045 78 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 HMGN1P30-201ENST00000589286 268 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AC126177.8-201ENST00000618339 1015 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 AL138960.2-201ENST00000625145 535 ntBASIC0.46□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-562P-201ENST00000362731 107 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 RNA5SP259-201ENST00000365541 109 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 SNORD99-201ENST00000408612 74 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 MIR1912-201ENST00000410389 80 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC092809.3-201ENST00000415453 231 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 CALM2P2-201ENST00000428512 440 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC112206.4-201ENST00000515142 405 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AP002360.4-201ENST00000606980 481 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC091965.4-201ENST00000607691 587 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC009509.4-201ENST00000619202 509 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 Z69720.2-201ENST00000624755 279 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 RNU4-1-201ENST00000363925 141 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-418P-201ENST00000384035 107 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-378P-201ENST00000384324 107 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 SNORD115.1-201ENST00000391109 76 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC013470.1-201ENST00000453438 462 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-856P-201ENST00000516959 98 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AL158042.1-201ENST00000605338 460 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC104458.1-201ENST00000608243 463 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 AC021506.2-201ENST00000612354 169 ntBASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN10AQ9Y5Y9 MIR578-201ENST00000384828 96 ntBASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 RNA5SP467-201ENST00000391274 118 ntBASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 AL117351.1-201ENST00000438864 766 ntBASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 MTND1P12-201ENST00000455231 147 ntBASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 SRRM1P2-201ENST00000464531 1192 ntBASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 AC009994.1-201ENST00000606889 253 ntBASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.44□□□□□ -2.34
SCN10AQ9Y5Y9 Y_RNA.110-201ENST00000363220 99 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms