Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AP003730.1-201ENST00000524605 285 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 AP000867.2-201ENST00000532468 320 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 AC131055.1-201ENST00000584626 316 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 uc_338.14-201ENST00000613162 166 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 ZYXP1-201ENST00000617638 118 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 MIR3653-201ENST00000625572 110 ntBASIC4□□□□□ -1.77
HRH3Q9Y5N1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HRH3Q9Y5N1 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 AC006971.1-201ENST00000407916 4486 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 Y_RNA.114-201ENST00000363265 113 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 RNU6-647P-201ENST00000364243 107 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 RNU2-70P-201ENST00000410718 179 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 RPL35AP15-201ENST00000468042 339 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 SNORD33.1-201ENST00000516213 88 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 NDUFA5P6-201ENST00000542110 379 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 AC106785.1-201ENST00000565935 262 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 AC079587.1-201ENST00000603846 277 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 AC113403.1-201ENST00000604910 193 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 AC007546.2-201ENST00000623996 360 ntBASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HRH3Q9Y5N1 Z82209.1-201ENST00000422141 2135 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 MIR1283-1-201ENST00000408494 87 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 RNA5SP89-201ENST00000410300 108 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 SNORA74C-2-201ENST00000411179 201 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC011998.1-201ENST00000433403 117 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC010099.1-201ENST00000455434 375 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 HMGN2P16-201ENST00000456802 261 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC090515.1-201ENST00000465295 476 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 RN7SL691P-201ENST00000494487 301 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC083906.5-201ENST00000503722 328 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 Y_RNA.694-201ENST00000516677 117 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 RNU6-1098P-201ENST00000516772 96 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC079598.5-201ENST00000547460 117 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 VN1R85P-201ENST00000601587 426 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 snoZ196.1-201ENST00000625269 89 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 AC010300.1-201ENST00000600671 5134 ntBASIC3.98□□□□□ -1.77
HRH3Q9Y5N1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 AC058791.1-201ENST00000608412 3198 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 AL356292.1-201ENST00000283110 373 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RNU6-1336P-201ENST00000383886 109 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 MIR181A2-201ENST00000384863 110 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 SNORA26-201ENST00000391286 122 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RN7SKP27-201ENST00000410684 333 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 MLLT10P1-201ENST00000418346 262 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RPL39P40-201ENST00000445481 146 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RNU7-14P-201ENST00000459331 62 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 PARP4P3-201ENST00000510265 317 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RNA5SP153-201ENST00000516498 76 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 MIR2681-201ENST00000581814 105 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 AC020914.4-201ENST00000597690 277 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RPL30P11-203ENST00000598995 310 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 AL049861.1-201ENST00000603130 150 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 AL138880.2-201ENST00000616214 239 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HRH3Q9Y5N1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
HRH3Q9Y5N1 MAPK10-253ENST00000641010 4072 ntBASIC3.96□□□□□ -1.77
HRH3Q9Y5N1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HRH3Q9Y5N1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms