Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 Y_RNA.389-201ENST00000383924 113 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 SNORA44-201ENST00000384584 132 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RPL21P75-201ENST00000396599 483 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RPL21P28-201ENST00000401418 483 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-985P-201ENST00000410182 104 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 BMS1P22-201ENST00000414726 313 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 MTCO3P8-201ENST00000453691 755 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RPL21P39-201ENST00000463605 483 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC107032.1-201ENST00000485945 480 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC093591.1-201ENST00000491435 481 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RPL21P16-201ENST00000495531 483 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC007536.1-201ENST00000533382 349 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR4680-201ENST00000580906 66 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR4298-201ENST00000584380 73 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AL356280.1-201ENST00000603614 379 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC005034.5-201ENST00000604219 466 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AL162373.1-201ENST00000620433 407 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC006386.2-201ENST00000624491 75 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC012005.1-201ENST00000624575 75 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR622-201ENST00000638396 96 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 Z82209.1-201ENST00000422141 2135 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.455-201ENST00000384230 98 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 RNY3P4-201ENST00000384428 101 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 SNORA46.1-201ENST00000391069 153 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AL139281.1-201ENST00000422120 335 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 EIF1P2-201ENST00000428233 350 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC112220.1-201ENST00000434628 355 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC107083.1-201ENST00000439643 279 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 RPL21P2-201ENST00000440049 481 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AL161788.1-201ENST00000441805 169 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC096638.1-201ENST00000444678 216 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 Z96811.1-201ENST00000445880 108 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.713-201ENST00000517013 96 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC022868.1-201ENST00000517767 391 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC022080.3-201ENST00000544433 482 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AL713866.2-201ENST00000603579 219 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AL360085.1-201ENST00000604713 532 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 AC091812.1-201ENST00000432235 1948 ntBASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHGA3Q9Y5H0 MTND4P1-201ENST00000457501 1466 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 SNORA63C-201ENST00000364578 129 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 snosnR66.1-201ENST00000391095 99 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 FO393413.1-201ENST00000402892 195 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR1294-201ENST00000408503 142 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 RNA5SP229-201ENST00000410809 99 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 AC096644.2-201ENST00000429278 159 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 WARS2P1-201ENST00000429678 537 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-764P-201ENST00000516396 105 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 HSPE1P18-201ENST00000517602 280 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 HSPE1P20-201ENST00000538133 289 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 AP002770.2-201ENST00000543613 532 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHGA3Q9Y5H0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU1-62P-201ENST00000362599 164 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 RNY3P11-201ENST00000364153 102 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-281P-201ENST00000384212 103 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.551-201ENST00000384661 102 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR10B-201ENST00000385011 110 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 UBE2DNL-203ENST00000474922 222 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AC008885.1-201ENST00000514930 301 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.720-201ENST00000517166 92 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AC040926.1-201ENST00000530195 238 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AC018630.3-201ENST00000542637 96 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR3117-201ENST00000584034 78 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AL390123.1-201ENST00000603216 237 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AC124312.5-201ENST00000604451 268 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AC005562.2-201ENST00000618264 111 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 ZNF204P-201ENST00000416749 2397 ntBASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA3Q9Y5H0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA3Q9Y5H0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PCDHGA3Q9Y5H0 RNU6-222P-201ENST00000362438 107 ntBASIC3.02□□□□□ -1.93
PCDHGA3Q9Y5H0 RNU1-76P-201ENST00000362903 159 ntBASIC3.02□□□□□ -1.93
PCDHGA3Q9Y5H0 RNU6-879P-201ENST00000364328 108 ntBASIC3.02□□□□□ -1.93
PCDHGA3Q9Y5H0 MIR95-201ENST00000385072 81 ntBASIC3.02□□□□□ -1.93
PCDHGA3Q9Y5H0 Y_RNA.597-201ENST00000410463 100 ntBASIC3.02□□□□□ -1.93
PCDHGA3Q9Y5H0 MTND2P23-201ENST00000422990 651 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms