Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AL163973.1-201ENST00000484753 577 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 ARL2BPP4-201ENST00000506854 471 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AC005178.1-201ENST00000508392 440 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RNA5SP384-201ENST00000516615 116 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 RN7SKP88-201ENST00000516847 250 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 MRPS36P3-201ENST00000519284 130 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AC103996.1-201ENST00000555468 102 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 MIR4703-201ENST00000577728 79 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 MIR4753-201ENST00000585119 83 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 7SK.8-201ENST00000612110 250 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 7SK.11-201ENST00000615477 250 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 7SK.13-201ENST00000622040 250 ntBASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.02□□□□□ -2.25
RHBDD3Q9Y3P4 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-1106P-201ENST00000390845 107 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 SNORD70.1-201ENST00000391007 85 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 MIR1283-1-201ENST00000408494 87 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 MRPL35P3-201ENST00000421557 364 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AC060773.1-201ENST00000421698 310 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AL593851.1-201ENST00000426171 157 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AC009961.2-201ENST00000435771 251 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AC073910.1-201ENST00000445047 438 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AC114982.1-201ENST00000469402 321 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AL133373.1-201ENST00000497098 94 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AC026470.2-201ENST00000561492 181 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AP000942.3-201ENST00000603702 160 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AL391646.1-201ENST00000603860 190 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AC064872.1-201ENST00000604823 1072 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AL365434.2-201ENST00000607979 234 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AL157834.3-201ENST00000615543 103 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 MIR338-201ENST00000636369 67 ntBASIC1.01□□□□□ -2.25
RHBDD3Q9Y3P4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-266P-201ENST00000364225 107 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 Y_RNA.399-201ENST00000383955 105 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-1235P-201ENST00000384559 107 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 MTND2P39-201ENST00000457230 764 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-498P-201ENST00000459468 107 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 AC093852.1-201ENST00000503587 266 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-948P-201ENST00000516374 107 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 MTND2P32-201ENST00000521584 1038 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 MIR3664-201ENST00000579074 99 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 AP001506.1-201ENST00000615444 211 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 AC126177.8-201ENST00000618339 1015 ntBASIC1□□□□□ -2.25
RHBDD3Q9Y3P4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 RNU4-91P-201ENST00000364778 135 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 RNU5A-2P-201ENST00000384337 116 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-1127P-201ENST00000384580 107 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-331P-201ENST00000384724 107 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC090960.1-201ENST00000421072 306 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 USP9YP14-201ENST00000430663 563 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC010486.2-201ENST00000505572 483 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC024995.1-201ENST00000523014 93 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC245014.2-201ENST00000603689 287 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC246785.4-201ENST00000605374 287 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC002044.1-201ENST00000606707 158 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 MIR98-201ENST00000606724 119 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 AL359757.2-201ENST00000624309 274 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 SNORA43.4-201ENST00000629559 138 ntBASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RHBDD3Q9Y3P4 SNORA25-201ENST00000384384 134 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 SNORA16.2-201ENST00000390991 127 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 RNU6-1093P-201ENST00000391194 107 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 RPS6P15-201ENST00000431996 751 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AC074290.1-201ENST00000448883 135 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AL033528.1-201ENST00000453780 140 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 RPS29P15-201ENST00000458329 171 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 UBL5P1-201ENST00000507979 193 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 MTND1P22-201ENST00000510572 951 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AC106038.2-201ENST00000520706 568 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AL442163.3-201ENST00000554110 156 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AC011458.1-201ENST00000604034 617 ntBASIC0.98□□□□□ -2.25
RHBDD3Q9Y3P4 AC068787.1-201ENST00000623908 691 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms