Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 BTF3P4-201ENST00000418852 495 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 NCOR1P3-201ENST00000420479 303 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 MTND3P9-201ENST00000429526 346 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AP005597.4-201ENST00000526762 229 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AC087441.2-201ENST00000529141 262 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AC017083.3-201ENST00000609955 700 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 AL158209.2-201ENST00000619266 216 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 MIR6863-201ENST00000636112 90 ntBASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
NPIPA1Q9UND3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 RNU6-38P-201ENST00000384085 107 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 snoU13.6-201ENST00000458785 104 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 RPL9P9-202ENST00000466501 579 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AC087854.1-201ENST00000519706 414 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AC104383.1-201ENST00000530297 370 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AP003034.1-201ENST00000534621 422 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AC005786.1-201ENST00000588553 154 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AP001330.5-201ENST00000607176 411 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 AC103705.1-201ENST00000619013 241 ntBASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NPIPA1Q9UND3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 RNU6-82P-201ENST00000363970 107 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AL358453.1-201ENST00000422522 250 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC006026.1-201ENST00000444025 1803 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 RNU1-131P-201ENST00000458943 161 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 SRRM1P2-201ENST00000464531 1192 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 RPS23P5-201ENST00000495419 428 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC097473.1-201ENST00000508142 408 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC025465.4-201ENST00000513422 638 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC104581.2-201ENST00000572227 430 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 MIR5094-201ENST00000578766 85 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC010900.2-201ENST00000604508 210 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 AC068792.1-201ENST00000621354 417 ntBASIC1.53□□□□□ -2.16
NPIPA1Q9UND3 MTND5P26-201ENST00000426018 1752 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 MIR340-201ENST00000362125 95 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 RNU6-227P-201ENST00000362865 103 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 RNU6-1322P-201ENST00000364309 107 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 RNU4-20P-201ENST00000365601 151 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 RNU6-439P-201ENST00000384188 106 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 SNORD116-1-201ENST00000384335 95 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 TIMM9P3-201ENST00000428659 274 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AC007547.1-201ENST00000462177 490 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AC083798.1-201ENST00000472671 131 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AC010409.1-201ENST00000487382 476 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 SNORA31.17-201ENST00000516953 127 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 MTND2P38-201ENST00000522536 667 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 MIR5692C1-201ENST00000585309 91 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AC009994.1-201ENST00000606889 253 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AC064807.4-201ENST00000607201 407 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 AC022513.1-201ENST00000624512 117 ntBASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NPIPA1Q9UND3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 SNORD31B-201ENST00000364977 69 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 SNORA18.2-201ENST00000383865 132 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 USP9YP14-201ENST00000430663 563 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 MTND3P16-201ENST00000452205 344 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
NPIPA1Q9UND3 RNU6-261P-201ENST00000459506 102 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms