Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AC004584.2-201ENST00000570407 410 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 RNU6-91P-201ENST00000607774 107 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AC006157.1-201ENST00000611750 366 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 MIR6766-201ENST00000622641 72 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AL450472.1-202ENST00000637286 180 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 RNU6-874P-201ENST00000362390 105 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 RNU6-212P-201ENST00000362642 104 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 RNY3P11-201ENST00000364153 102 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.577-201ENST00000384794 101 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 RNU6-1156P-201ENST00000410365 100 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 RNU2-23P-201ENST00000410545 195 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 RN7SKP61-201ENST00000410642 295 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC092423.1-201ENST00000430165 186 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC112771.1-201ENST00000463581 102 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC104564.1-201ENST00000493028 407 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 SNORD116.3-201ENST00000517176 78 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 MIR4435-1-201ENST00000582552 80 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC010928.2-201ENST00000588017 287 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC092447.9-201ENST00000603395 144 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AL356157.2-201ENST00000605122 111 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC083806.3-201ENST00000614016 455 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AL159153.1-201ENST00000619688 317 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.45□□□□□ -2.02
SIX4Q9UIU6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC002543.1-201ENST00000299783 1954 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 RNU6-529P-201ENST00000363383 104 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.314-201ENST00000365114 102 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 SNORA29-201ENST00000384183 140 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AL139095.1-201ENST00000404326 391 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 Z98742.2-201ENST00000431564 187 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC244670.1-201ENST00000436879 112 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC099799.1-201ENST00000439809 192 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC009296.1-201ENST00000443146 155 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AL353705.4-201ENST00000449661 238 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 CHEK2P4-201ENST00000450340 246 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 RPL30P10-201ENST00000488148 337 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 RPL23AP75-201ENST00000491601 451 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 SNORA31.16-201ENST00000516773 139 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 RNU6-988P-201ENST00000519081 107 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AL590705.4-201ENST00000532209 134 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 CBX3P7-201ENST00000532876 502 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC007375.1-201ENST00000554513 578 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AC064859.1-201ENST00000624741 174 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 SCARNA4-201ENST00000629045 128 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 AL109809.4-201ENST00000603520 2185 ntBASIC2.44□□□□□ -2.02
SIX4Q9UIU6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.364-201ENST00000365532 101 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.405-201ENST00000383979 100 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RNU6-1032P-201ENST00000384100 107 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.451-201ENST00000384200 100 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RNU6-301P-201ENST00000384277 107 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.524-201ENST00000384564 100 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.561-201ENST00000384694 100 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RNU6-700P-201ENST00000391043 107 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RNA5SP508-201ENST00000411327 119 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 Z98742.3-201ENST00000418637 326 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 GPM6BP3-201ENST00000442797 145 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 snoU13.6-201ENST00000458785 104 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 TOMM22P6-201ENST00000465035 409 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RPL23AP70-201ENST00000483361 460 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 AC016632.1-201ENST00000503994 196 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 MIR5571-201ENST00000577998 113 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 AL078605.1-201ENST00000603529 500 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 AL360085.1-201ENST00000604713 532 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 AC096772.1-201ENST00000609146 564 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms