Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 AC023934.1-201ENST00000574529 2389 ntBASIC0.46□□□□□ -2.34
VPS29Q9UBQ0 RNU6-545P-201ENST00000362681 104 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-37P-201ENST00000362692 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-11P-201ENST00000364234 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 SNORA25.9-201ENST00000365087 128 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-25P-201ENST00000383873 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-1-201ENST00000383898 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-48P-201ENST00000384161 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-36P-201ENST00000384172 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-4P-201ENST00000384205 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-5P-201ENST00000384238 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-3P-201ENST00000384314 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-16P-201ENST00000384385 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-505P-201ENST00000384427 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-809P-201ENST00000384461 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 SNORA80D-201ENST00000384488 135 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-15P-201ENST00000384534 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-2-201ENST00000384627 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-29P-201ENST00000384637 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-1031P-201ENST00000384773 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-9-201ENST00000384776 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-33P-201ENST00000384793 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 AC002486.1-201ENST00000435098 391 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RPS24P1-201ENST00000438550 371 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 TAF9P1-201ENST00000445421 515 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 TAF9P2-201ENST00000454958 515 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-567P-201ENST00000516746 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 ZNF519P3-201ENST00000557158 1032 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNU6-6P-201ENST00000606623 107 ntBASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS29Q9UBQ0 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 Y_RNA.164-201ENST00000363709 102 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 RNU6-61P-201ENST00000365528 109 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 MED13P1-201ENST00000428342 171 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AL133396.1-201ENST00000432048 687 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 HSFY7P-201ENST00000432672 318 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AC092628.1-201ENST00000436250 252 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 HMGN2P34-201ENST00000437647 269 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 HSFY8P-201ENST00000437934 318 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AC016632.1-201ENST00000503994 196 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 RNU6-685P-201ENST00000517088 95 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AC109479.2-201ENST00000517842 174 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 BNIP3P40-201ENST00000596017 556 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AL356157.2-201ENST00000605122 111 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AC009994.1-201ENST00000606889 253 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 GHRLOS.1-201ENST00000610995 70 ntBASIC0.44□□□□□ -2.34
VPS29Q9UBQ0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 Y_RNA.97-201ENST00000363094 102 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 MIR558-201ENST00000384920 94 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 MIR300-201ENST00000401138 83 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 MIR208B-201ENST00000401172 77 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 AC010154.1-201ENST00000425857 269 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 AC119618.1-201ENST00000434191 222 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 MTCO3P18-201ENST00000440206 761 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 GAPDHP17-201ENST00000449858 1001 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 SRRM1P2-201ENST00000464531 1192 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 MTCO2P29-201ENST00000465212 189 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 MTCO3P7-201ENST00000510008 774 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 AC091489.2-201ENST00000566263 604 ntBASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS29Q9UBQ0 RNU6-428P-201ENST00000362942 107 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 Y_RNA.324-201ENST00000365165 102 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 MTCYBP36-201ENST00000404146 440 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 MIR1283-1-201ENST00000408494 87 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 RNU6-757P-201ENST00000410334 100 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 AC024995.1-201ENST00000523014 93 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 APOOP3-201ENST00000536787 586 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 MIR5000-201ENST00000577717 103 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 MIR151B-201ENST00000584249 96 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 MIR4753-201ENST00000585119 83 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 AL512605.2-201ENST00000592972 256 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 AC005520.5-201ENST00000613926 164 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 AC106754.2-201ENST00000623006 233 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 AL450472.1-202ENST00000637286 180 ntBASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
VPS29Q9UBQ0 RNU6-45P-201ENST00000384471 107 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 RNA5SP323-201ENST00000391094 133 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 RNU6-387P-201ENST00000411331 105 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 AC007283.2-201ENST00000424739 197 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 SNAP23P1-201ENST00000433229 246 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms