Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RNU6-110P-201ENST00000384508 104 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-1257P-201ENST00000384625 110 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 RNU2-3P-201ENST00000410144 191 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 RNU2-64P-201ENST00000411315 191 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AC002486.1-201ENST00000435098 391 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AC244670.1-201ENST00000436879 112 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 MTCO3P18-201ENST00000440206 761 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 ART2BP-201ENST00000453501 499 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 MTCO3P7-201ENST00000510008 774 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-377P-201ENST00000515965 102 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AP001893.2-201ENST00000526949 202 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AC022432.1-201ENST00000595739 310 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AL158032.1-201ENST00000605401 106 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AL139286.2-201ENST00000606838 396 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 AC099786.3-201ENST00000565735 1410 ntBASIC0.37□□□□□ -2.35
PHRF1Q9P1Y6 SNORA72.2-201ENST00000365028 127 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-43P-201ENST00000384302 107 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 Y_RNA.472-201ENST00000384322 102 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AL606489.2-201ENST00000433886 234 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 RPS25P9-201ENST00000435591 252 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 RNU7-51P-201ENST00000516560 62 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AC090142.3-201ENST00000519012 385 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 BNIP3P16-201ENST00000589779 534 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AL139022.2-201ENST00000606934 443 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 AC006386.1-201ENST00000619436 415 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 SNORD98-201ENST00000636377 67 ntBASIC0.36□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-1123P-201ENST00000362347 106 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 U3.4-201ENST00000363352 213 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 Y_RNA.549-201ENST00000384657 102 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-910P-201ENST00000390844 107 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL022718.1-201ENST00000412004 84 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC060773.1-201ENST00000421698 310 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RAB28P5-201ENST00000427490 651 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RPL39P38-201ENST00000467018 153 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AP000797.1-201ENST00000478870 387 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-1098P-201ENST00000516772 96 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-165P-201ENST00000517170 99 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC123904.2-201ENST00000548059 300 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC090888.2-201ENST00000559765 1144 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 DEFB131E-202ENST00000602581 683 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL590229.1-201ENST00000603497 542 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC107304.1-201ENST00000604229 296 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AP002360.4-201ENST00000606980 481 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 GHRLOS.1-201ENST00000610995 70 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL391994.1-201ENST00000254724 282 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 SNORA4.1-201ENST00000364263 144 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-378P-201ENST00000384324 107 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-950P-201ENST00000384651 107 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-607P-201ENST00000411283 108 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 Z95118.1-201ENST00000421372 247 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL162395.1-201ENST00000457882 422 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC016925.1-201ENST00000458303 298 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC048334.1-201ENST00000477975 159 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC074344.1-201ENST00000512823 224 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC104136.1-201ENST00000512969 394 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 RNU6-948P-201ENST00000516374 107 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC016256.1-201ENST00000547971 354 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 TMF1P1-201ENST00000576058 373 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 MIR4709-201ENST00000577272 72 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL451064.1-201ENST00000607718 471 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC097478.2-201ENST00000610572 514 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL353149.1-201ENST00000610667 244 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC021506.2-201ENST00000612354 169 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AC005520.5-201ENST00000613926 164 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 AL121895.2-201ENST00000619558 447 ntBASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.35□□□□□ -2.35
PHRF1Q9P1Y6 Y_RNA.110-201ENST00000363220 99 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 Y_RNA.192-201ENST00000363977 102 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 Y_RNA.324-201ENST00000365165 102 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 SNORD116.1-201ENST00000365628 92 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 AC092809.3-201ENST00000415453 231 ntBASIC0.34□□□□□ -2.36
PHRF1Q9P1Y6 MTCO2P21-201ENST00000419780 677 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms