Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNU6-727P-201ENST00000363592 107 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 RNU6-805P-201ENST00000365643 106 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 RNU6-793P-201ENST00000384233 104 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 RNU1-57P-201ENST00000384491 166 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AL033519.2-201ENST00000403958 392 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 UQCRBP2-201ENST00000447827 297 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AC091179.3-201ENST00000474761 144 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AL121594.1-201ENST00000475906 575 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 SERF1AP1-201ENST00000514575 187 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 SNORD59.2-201ENST00000516873 68 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AK6P2-201ENST00000549020 471 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 AL356575.1-201ENST00000603008 283 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 PCGEM1.1-201ENST00000613431 131 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AL109809.4-201ENST00000603520 2185 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 RNU1-75P-201ENST00000347264 129 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 RNU6-1175P-201ENST00000365200 107 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 RNU6-245P-201ENST00000384020 107 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 Y_RNA.570-201ENST00000384750 101 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AL512633.1-201ENST00000399931 655 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 MIR320B2-201ENST00000408479 138 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 RNA5SP201-201ENST00000410316 124 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 RN7SL601P-201ENST00000471221 293 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC145146.1-201ENST00000496370 254 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC079598.5-201ENST00000547460 117 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC005176.2-201ENST00000596933 147 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 SNRPGP20-201ENST00000604477 205 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC018692.3-201ENST00000623929 123 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC135776.4-201ENST00000624300 1904 ntBASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCMF1Q9P0J7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AC099654.7-201ENST00000635788 2127 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 SNORA53-201ENST00000391141 249 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AC007395.1-201ENST00000451333 677 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 BX510359.1-201ENST00000456973 237 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 RNU6-625P-201ENST00000459412 107 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 RNU6-138P-201ENST00000515952 107 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AC018448.1-201ENST00000552843 316 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AL161756.2-201ENST00000604597 246 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 BX284668.6-201ENST00000606899 438 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 U2.14-201ENST00000615943 113 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 Z83843.1-201ENST00000604070 3685 ntBASIC3.13□□□□□ -1.91
KCMF1Q9P0J7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC073346.2-201ENST00000624724 2058 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 Y_RNA.230-201ENST00000364348 109 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 SNORA18.3-201ENST00000384122 132 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 Y_RNA.498-201ENST00000384460 102 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 Y_RNA.569-201ENST00000384749 103 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 RNA5SP120-201ENST00000410900 112 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC027124.2-201ENST00000428249 105 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 MTND5P15-201ENST00000434246 349 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 IFNA11P-201ENST00000446352 526 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 RPL23AP3-201ENST00000453844 468 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 RPS3P1-201ENST00000456781 192 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 SNORA70.24-201ENST00000517233 118 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 CYCSP23-201ENST00000519781 313 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms