Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 EIF4E2P1-201ENST00000393781 255 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 EBAG9P1-201ENST00000418955 543 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 MTCO3P46-201ENST00000425787 232 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC008628.2-201ENST00000502605 298 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 HMGN1P13-201ENST00000505795 138 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC008549.1-201ENST00000512900 643 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 RNU6-1281P-201ENST00000516223 105 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 Y_RNA.704-201ENST00000516851 102 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 RNU6-612P-201ENST00000516909 102 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC091544.4-201ENST00000555268 342 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 HMGB1P33-201ENST00000563485 527 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC109446.1-201ENST00000566172 220 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 MIR4298-201ENST00000584380 73 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AL162413.1-201ENST00000603198 110 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 Z98751.3-201ENST00000604447 521 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC097065.2-201ENST00000608159 533 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC064836.2-201ENST00000609491 462 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC068137.3-201ENST00000639191 341 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 MTND4P23-201ENST00000447723 1363 ntBASIC1.55□□□□□ -2.16
SMPD3Q9NY59 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
SMPD3Q9NY59 AC009541.1-201ENST00000438279 2662 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
SMPD3Q9NY59 Y_RNA.372-201ENST00000365599 102 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 RNU6-1329P-201ENST00000365664 107 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 Y_RNA.436-201ENST00000384097 102 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 RNU6-1068P-201ENST00000410958 103 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AC016907.1-201ENST00000419483 435 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SMPD3Q9NY59 DLGAP5P1-201ENST00000430307 464 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 FTH1P12-201ENST00000432137 551 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AC003989.2-201ENST00000440224 169 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AL359672.1-201ENST00000442302 409 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 U8.21-201ENST00000459536 136 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AC104564.1-201ENST00000493028 407 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 RPL38P4-201ENST00000502376 214 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 RPL23AP94-201ENST00000512518 302 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.54□□□□□ -2.16
SMPD3Q9NY59 CYP4A27P-201ENST00000567218 190 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AC004492.1-201ENST00000607036 742 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AC092954.2-201ENST00000609103 430 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AL136221.1-201ENST00000621449 509 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 SNORA43.4-201ENST00000629559 138 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AL450472.1-202ENST00000637286 180 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 AC099654.12-201ENST00000639868 649 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SMPD3Q9NY59 OR4G1P-203ENST00000641984 1631 ntBASIC1.54□□□□□ -2.16
SMPD3Q9NY59 RNU6-227P-201ENST00000362865 103 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 RNU6-112P-201ENST00000363599 104 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SMPD3Q9NY59 SNORA32.2-201ENST00000384049 122 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 RNU6-483P-201ENST00000384088 108 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 RNU6-214P-201ENST00000384130 107 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 SNORA36A-201ENST00000384221 132 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.53□□□□□ -2.16
SMPD3Q9NY59 MRPS10P2-201ENST00000431226 381 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 ERLEC1P1-201ENST00000433806 578 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 UBE2V1P8-201ENST00000437166 265 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SMPD3Q9NY59 AC097473.1-201ENST00000508142 408 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.53□□□□□ -2.16
SMPD3Q9NY59 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.53□□□□□ -2.16
SMPD3Q9NY59 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.53□□□□□ -2.16
SMPD3Q9NY59 RNU6-89P-201ENST00000606519 100 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 DISC2.1-201ENST00000612827 205 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 PCGEM1.1-201ENST00000613431 131 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 AC015540.1-201ENST00000615828 501 ntBASIC1.53□□□□□ -2.16
SMPD3Q9NY59 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.53□□□□□ -2.17
SMPD3Q9NY59 AC121333.1-201ENST00000567488 2709 ntBASIC1.53□□□□□ -2.17
SMPD3Q9NY59 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.52□□□□□ -2.17
SMPD3Q9NY59 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SMPD3Q9NY59 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SMPD3Q9NY59 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 MIR208B-201ENST00000401172 77 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 MIR1267-201ENST00000408723 78 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.52□□□□□ -2.17
SMPD3Q9NY59 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.52□□□□□ -2.17
SMPD3Q9NY59 MTND3P9-201ENST00000429526 346 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 MTCO2P7-201ENST00000446518 666 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.52□□□□□ -2.17
SMPD3Q9NY59 RPL9P9-202ENST00000466501 579 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 AC114801.2-201ENST00000503825 781 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 AC025465.4-201ENST00000513422 638 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 RNU6-506P-201ENST00000516553 94 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 RNU6-314P-201ENST00000516574 104 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 AK6P1-201ENST00000540219 478 ntBASIC1.52□□□□□ -2.17
SMPD3Q9NY59 EIF4A1P12-201ENST00000551910 141 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms