Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.132-201ENST00000363421 102 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 MIR499A-201ENST00000384903 122 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 MIR1287-201ENST00000408492 90 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 MTND2P18-201ENST00000419962 1030 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 RPS6P15-201ENST00000431996 751 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 FTH1P12-201ENST00000432137 551 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AC002486.1-201ENST00000435098 391 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AL135790.2-201ENST00000437701 267 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 snoU13.30-201ENST00000458951 104 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 RPS23P5-201ENST00000495419 428 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 RNU6-567P-201ENST00000516746 107 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 CYP4A27P-201ENST00000567218 190 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 SNORA77B-201ENST00000578179 125 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AP005136.1-201ENST00000579765 429 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AC069114.2-201ENST00000604699 304 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 RNU6-85P-201ENST00000605989 107 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AC087683.2-201ENST00000611384 326 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AC009161.2-201ENST00000624626 138 ntBASIC1.14□□□□□ -2.23
TREX1Q9NSU2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TREX1Q9NSU2 AL391987.6-201ENST00000305671 199 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 FGF7P2-201ENST00000332473 296 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 RNU4-91P-201ENST00000364778 135 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 SNORA26.3-201ENST00000391119 136 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 SNORA26.8-201ENST00000391306 124 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 PIGFP2-201ENST00000421400 651 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 CST2P1-201ENST00000425770 87 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 RPL23AP95-201ENST00000426806 265 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 JTBP1-201ENST00000441314 247 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 SNRPFP3-201ENST00000457792 225 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 RPL26P26-201ENST00000480251 434 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.13□□□□□ -2.23
TREX1Q9NSU2 AC008628.2-201ENST00000502605 298 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 AP001836.1-201ENST00000604675 523 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
TREX1Q9NSU2 AC010615.1-201ENST00000594254 1764 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 AL390237.1-201ENST00000404226 1415 ntBASIC1.13□□□□□ -2.23
TREX1Q9NSU2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
TREX1Q9NSU2 SNORA25.9-201ENST00000365087 128 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU6-877P-201ENST00000383868 107 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU5A-2P-201ENST00000384337 116 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU6-606P-201ENST00000384721 111 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU6-360P-201ENST00000390944 104 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU6-1093P-201ENST00000391194 107 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU2-29P-201ENST00000410423 189 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC004965.1-201ENST00000413033 213 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.12□□□□□ -2.23
TREX1Q9NSU2 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.12□□□□□ -2.23
TREX1Q9NSU2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC099677.2-201ENST00000436385 175 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC007395.1-201ENST00000451333 677 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 GMFBP1-201ENST00000467831 427 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC005840.1-201ENST00000498412 377 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU6-1041P-201ENST00000516254 102 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 SUB1P2-201ENST00000556401 297 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AL391262.2-201ENST00000622466 494 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 AL450472.1-202ENST00000637286 180 ntBASIC1.12□□□□□ -2.23
TREX1Q9NSU2 RNU1-96P-201ENST00000364163 162 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 SNORD1A-201ENST00000364968 72 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 RNU6-1106P-201ENST00000390845 107 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 ARL5AP1-201ENST00000418991 388 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC012306.1-201ENST00000423267 114 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC244505.5-201ENST00000443639 207 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC010531.2-201ENST00000465012 153 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC091435.1-201ENST00000505442 584 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC079140.2-201ENST00000506193 142 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC079140.3-201ENST00000511111 550 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 SNORD60.2-201ENST00000516883 86 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 RNA5SP437-201ENST00000517249 129 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC019176.1-201ENST00000518519 225 ntBASIC1.11□□□□□ -2.23
TREX1Q9NSU2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.11□□□□□ -2.23
TREX1Q9NSU2 AC025449.1-201ENST00000603896 529 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms