Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MIR32-201ENST00000384965 70 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 RNU2-48P-201ENST00000410694 191 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 AC022028.1-201ENST00000412054 408 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 AC104581.2-201ENST00000572227 430 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 MIR5701-3-201ENST00000578890 82 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 MIR5701-1-201ENST00000585138 82 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 MIR5701-2-201ENST00000615634 82 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 AL359697.1-201ENST00000624879 587 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 MTND4LP32-201ENST00000636111 270 ntBASIC2.34□□□□□ -2.03
SLC6A13Q9NSD5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A13Q9NSD5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A13Q9NSD5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A13Q9NSD5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A13Q9NSD5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 MIR449A-201ENST00000362113 91 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-26P-201ENST00000383985 107 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 MIR153-2-201ENST00000385225 87 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 SNORA75.6-201ENST00000391318 127 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-1304P-201ENST00000411374 106 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 MTCO2P27-201ENST00000420740 428 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC236972.2-201ENST00000434979 310 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 SNORD109B-201ENST00000458961 67 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 SNORD109A-201ENST00000459128 67 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 SNORD19B-201ENST00000459623 84 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC007215.1-201ENST00000464893 276 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC068781.1-201ENST00000488231 618 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNU7-175P-201ENST00000515915 61 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-965P-201ENST00000516721 96 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.718-201ENST00000517110 102 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC034114.1-201ENST00000520293 285 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC090517.1-201ENST00000569307 266 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 MIR4795-201ENST00000584182 89 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 RPL17P51-201ENST00000605218 238 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AL132822.1-201ENST00000617063 513 ntBASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SLC6A13Q9NSD5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-859P-201ENST00000362728 107 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RNY1P16-201ENST00000363063 111 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-17P-201ENST00000384245 107 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-611P-201ENST00000384276 104 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-18P-201ENST00000384527 107 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 SNORA12.2-201ENST00000391040 156 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 MTCO3P29-201ENST00000432119 779 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AL353997.1-201ENST00000432936 108 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RPL23AP50-201ENST00000434149 455 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 MTCO3P10-201ENST00000455912 772 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 ELOCP24-201ENST00000456370 334 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RPL30P15-201ENST00000457129 321 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.675-201ENST00000516389 149 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-667P-201ENST00000517186 102 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AC026470.2-201ENST00000561492 181 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 MIR3162-201ENST00000581818 82 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AC016727.2-201ENST00000603988 621 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 AC104985.2-201ENST00000620598 500 ntBASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SLC6A13Q9NSD5 ZNF658B-202ENST00000615961 3375 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 AL136360.1-201ENST00000503377 1900 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNU4-79P-201ENST00000362764 141 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.58-201ENST00000362807 102 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 Y_RNA.154-201ENST00000363624 102 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 SNORD115-8-201ENST00000363856 82 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 SNORD115-38-201ENST00000365037 82 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNY3P1-201ENST00000365085 102 ntBASIC2.31□□□□□ -2.04
SLC6A13Q9NSD5 RNU6-234P-201ENST00000365229 104 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms