Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AP000560.1-201ENST00000624150 1937 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 RNU6-1286P-201ENST00000383871 107 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 RNU1-109P-201ENST00000383960 147 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 MIR625-201ENST00000385047 85 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 MRPL42P3-201ENST00000401492 326 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 RN7SKP61-201ENST00000410642 295 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AC138623.1-201ENST00000418060 216 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AC078809.1-201ENST00000427601 140 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AC112771.1-201ENST00000463581 102 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 SNRPGP7-201ENST00000469016 106 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AC016632.1-201ENST00000503994 196 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AC105758.1-201ENST00000506038 399 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AC091874.1-201ENST00000511402 339 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS45Q9NRW7 GNAI2P1-201ENST00000541815 315 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 HSPE1P4-201ENST00000550617 308 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 MIR5571-201ENST00000577998 113 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 AL159153.1-201ENST00000619688 317 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 MIR7843-201ENST00000622274 79 ntBASIC2.88□□□□□ -1.95
VPS45Q9NRW7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS45Q9NRW7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS45Q9NRW7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VPS45Q9NRW7 MIR26A1-201ENST00000362205 77 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.158-201ENST00000363651 101 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 SNORA63C-201ENST00000364578 129 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 RNU4-9P-201ENST00000364951 139 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 RNA5SP240-201ENST00000365355 128 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 MIR181A2-201ENST00000384863 110 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 MIR186-201ENST00000384988 86 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 RNA5SP494-201ENST00000410653 129 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 AL160004.2-201ENST00000432935 350 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 AL353705.4-201ENST00000449661 238 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS45Q9NRW7 CYP2C59P-201ENST00000457790 269 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 RPL30P12-201ENST00000474666 353 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 RNU7-175P-201ENST00000515915 61 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 MRPS36P4-201ENST00000534436 298 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 AC007375.1-201ENST00000554513 578 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 AC104581.2-201ENST00000572227 430 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 RPL23AP88-201ENST00000605759 454 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS45Q9NRW7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 U4atac.1-201ENST00000618345 95 ntBASIC2.87□□□□□ -1.95
VPS45Q9NRW7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS45Q9NRW7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS45Q9NRW7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
VPS45Q9NRW7 MTND4P1-201ENST00000457501 1466 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AC092268.1-201ENST00000342691 405 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS45Q9NRW7 RNU6-859P-201ENST00000362728 107 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.145-201ENST00000363527 102 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 MIR95-201ENST00000385072 81 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AL133475.1-201ENST00000404414 305 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AL358453.1-201ENST00000422522 250 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AC092423.1-201ENST00000430165 186 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 ARL5AP4-201ENST00000430731 512 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AC244670.1-201ENST00000436879 112 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AC008413.1-201ENST00000511864 177 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 RNU6-475P-201ENST00000516073 104 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 RNU1-41P-201ENST00000516161 162 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 SNORA9.3-201ENST00000516383 129 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 RNU1-48P-201ENST00000516400 162 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AC144568.1-201ENST00000520139 137 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS45Q9NRW7 MIR5739-201ENST00000619803 80 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 SCARNA4-201ENST00000629045 128 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AC243829.7-201ENST00000633081 225 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AL606534.2-204ENST00000635008 178 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VPS45Q9NRW7 AC092593.1-201ENST00000515413 1815 ntBASIC2.86□□□□□ -1.95
VPS45Q9NRW7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 RNU1-72P-201ENST00000362976 153 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 MIR504-201ENST00000385065 83 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 MIR9-1-201ENST00000385198 89 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 SNORA12.2-201ENST00000391040 156 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 RNU2-63P-201ENST00000410792 194 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 GPM6BP3-201ENST00000442797 145 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 RPL23AP75-201ENST00000491601 451 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 AC015911.1-201ENST00000495111 156 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 RNU4-77P-201ENST00000516692 156 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 AC100812.1-201ENST00000607622 580 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms