Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RNU6-567P-201ENST00000516746 107 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 ELOCP32-201ENST00000548625 324 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AC008015.1-201ENST00000555505 465 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AL021879.1-201ENST00000611756 288 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 AC099654.13-201ENST00000639774 207 ntBASIC0.75□□□□□ -2.29
UBQLN4Q9NRR5 MIR96-201ENST00000362288 78 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 Y_RNA.367-201ENST00000365544 101 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 SNORA29-201ENST00000384183 140 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 SNORA26.3-201ENST00000391119 136 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 RNU6-1093P-201ENST00000391194 107 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 HMGN1P14-201ENST00000412459 517 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AC090960.1-201ENST00000421072 306 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AC010099.3-201ENST00000423896 409 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 GTF2IP13-201ENST00000438487 386 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 ZNF114P1-201ENST00000453500 292 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AC007547.1-201ENST00000462177 490 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 HMGN1P12-201ENST00000499125 195 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 SCARNA16.2-201ENST00000516520 172 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AC022878.1-201ENST00000530684 149 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AC008088.1-201ENST00000580993 280 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 AP000720.1-201ENST00000625091 483 ntBASIC0.74□□□□□ -2.29
UBQLN4Q9NRR5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 MIR373-201ENST00000362273 69 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 SNORA33-201ENST00000363664 130 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 RNU1-124P-201ENST00000363861 145 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 RNU1-93P-201ENST00000364704 169 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 AL606662.1-201ENST00000445763 553 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 RAP1BP2-201ENST00000478270 544 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 Vault.3-201ENST00000516676 95 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 SNORA70.22-201ENST00000517160 124 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 MIR4753-201ENST00000585119 83 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 AL356157.2-201ENST00000605122 111 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 RPL17P51-201ENST00000605218 238 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 AL020996.3-201ENST00000606617 222 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 AC009994.1-201ENST00000606889 253 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 MIR338-201ENST00000636369 67 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 MTND5P17-201ENST00000418405 1603 ntBASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
UBQLN4Q9NRR5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 RNY4P34-201ENST00000364779 95 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 SNORA72.2-201ENST00000365028 127 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 RPS29P13-201ENST00000402041 169 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 MIR1276-201ENST00000408707 83 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AL117339.3-201ENST00000418733 162 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 RPL23AP95-201ENST00000426806 265 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC073614.1-201ENST00000438690 650 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 UBE2D3P4-201ENST00000441973 436 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 EPS15P1-201ENST00000448836 336 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC016717.1-201ENST00000448918 286 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC013470.1-201ENST00000453438 462 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 MTCYBP1-201ENST00000454315 1119 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 RNU6-410P-201ENST00000517006 107 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 RNU2-46P-201ENST00000517038 113 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC008945.2-201ENST00000606056 604 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC002044.1-201ENST00000606707 158 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AP000240.1-201ENST00000609910 452 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AC108706.1-201ENST00000611053 297 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 AL450472.1-202ENST00000637286 180 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 BX322639.1-202ENST00000423987 2213 ntBASIC0.72□□□□□ -2.29
UBQLN4Q9NRR5 RNA5SP323-201ENST00000391094 133 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC012306.1-201ENST00000423267 114 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 HSFY7P-201ENST00000432672 318 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 HMGN2P34-201ENST00000437647 269 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 HSFY8P-201ENST00000437934 318 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 RPS4XP11-201ENST00000446897 772 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC008628.2-201ENST00000502605 298 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC067942.3-201ENST00000512025 362 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 SNORD116-28-201ENST00000516123 91 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC090572.1-201ENST00000519251 160 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 MIR4661-201ENST00000582720 75 ntBASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.71□□□□□ -2.3
UBQLN4Q9NRR5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms