Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.43□□□□□ -2.18
CCL28Q9NRJ3 AC233981.2-201ENST00000611524 1614 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 SNORD114-6-201ENST00000364393 72 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.373-201ENST00000365600 103 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.402-201ENST00000383972 102 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNU6-968P-201ENST00000384076 107 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNU6-933P-201ENST00000384424 107 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 SNORD116-4-201ENST00000384733 96 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 MIR676-201ENST00000390702 67 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNA5SP212-201ENST00000391223 107 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RPS26P42-201ENST00000413485 326 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 MTCO1P21-201ENST00000416634 589 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNU1-131P-201ENST00000458943 161 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNU7-14P-201ENST00000459331 62 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 RNU7-66P-201ENST00000459469 62 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 TOMM22P6-201ENST00000465035 409 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 ZNF519P2-201ENST00000557032 169 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC110588.1-201ENST00000559699 137 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 TPRKBP2-201ENST00000565969 475 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC146944.4-201ENST00000602697 718 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC091932.3-201ENST00000624223 323 ntBASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.42□□□□□ -2.18
CCL28Q9NRJ3 AC092881.1-201ENST00000638218 2733 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 CBX3P1-201ENST00000325243 554 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.9-201ENST00000362354 101 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 SNORD31B-201ENST00000364977 69 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 RNU6-438P-201ENST00000365561 103 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 MIR521-1-201ENST00000384902 87 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 SNORA48.1-201ENST00000390879 135 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 SNRPEP8-201ENST00000442866 260 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC016925.1-201ENST00000458303 298 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 RPL23AP42-201ENST00000471152 471 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC096745.1-201ENST00000509945 370 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC022254.1-201ENST00000567857 235 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 FGF7P1-201ENST00000582820 288 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AL133215.3-201ENST00000609801 448 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 RMST_3.1-201ENST00000611651 109 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 RMST_6.1-201ENST00000611980 203 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC005296.1-201ENST00000616145 209 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 AC131280.1-202ENST00000624067 4211 ntBASIC1.41□□□□□ -2.18
CCL28Q9NRJ3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CCL28Q9NRJ3 MIR340-201ENST00000362125 95 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.3-201ENST00000362331 103 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.100-201ENST00000363141 102 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RNY4P14-201ENST00000363656 96 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 SNORA18.2-201ENST00000383865 132 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RNU6-784P-201ENST00000384330 106 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 SNORA12.2-201ENST00000391040 156 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RNA5SP494-201ENST00000410653 129 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RNU6-373P-201ENST00000411247 98 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 VN1R36P-201ENST00000414936 291 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 AC139712.2-201ENST00000424302 339 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 MTCO3P18-201ENST00000440206 761 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RNU7-187P-201ENST00000458985 68 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 RPS23P5-201ENST00000495419 428 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 FAM206BP-201ENST00000510179 541 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 MTND1P5-201ENST00000517906 940 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 MTND1P35-201ENST00000526739 508 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 DEFB131C-201ENST00000528817 165 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 MRPS36P4-201ENST00000534436 298 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 MIR4435-1-201ENST00000582552 80 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 AC005786.1-201ENST00000588553 154 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 AC024614.3-201ENST00000637860 256 ntBASIC1.4□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.450-201ENST00000384198 113 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 Y_RNA.554-201ENST00000384672 102 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 RNU6-332P-201ENST00000391193 108 ntBASIC1.39□□□□□ -2.19
CCL28Q9NRJ3 AL356432.1-201ENST00000405809 419 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms