Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL442163.3-201ENST00000554110 156 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 AC010620.2-201ENST00000600135 313 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 AL670379.2-201ENST00000604983 252 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 AC004832.5-201ENST00000608677 401 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 AL078596.1-201ENST00000624856 447 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 MIR7515-201ENST00000637837 67 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VTA1Q9NP79 AC069528.2-201ENST00000624849 1991 ntBASIC3.23□□□□□ -1.89
VTA1Q9NP79 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VTA1Q9NP79 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.23□□□□□ -1.89
VTA1Q9NP79 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.23□□□□□ -1.89
VTA1Q9NP79 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VTA1Q9NP79 MTND5P16-201ENST00000460269 1703 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 BX322639.1-202ENST00000423987 2213 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RNU6-874P-201ENST00000362390 105 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 Y_RNA.389-201ENST00000383924 113 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RNU6-245P-201ENST00000384020 107 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 SNORA36A-201ENST00000384221 132 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RNU6-301P-201ENST00000384277 107 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RNU6-159P-201ENST00000391080 106 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 Y_RNA.645-201ENST00000391229 102 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RNA5SP201-201ENST00000410316 124 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.22□□□□□ -1.89
VTA1Q9NP79 MTCO3P8-201ENST00000453691 755 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RN7SL429P-201ENST00000479090 223 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RN7SL489P-201ENST00000486185 223 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RN7SL327P-201ENST00000488659 223 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 Y_RNA.713-201ENST00000517013 96 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RNU6-58P-201ENST00000517143 103 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 AC245166.1-201ENST00000521012 253 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 AC027288.2-201ENST00000553028 243 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 AC026470.2-201ENST00000561492 181 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 AC104695.3-201ENST00000604052 296 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 AL355297.3-201ENST00000604082 446 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 RN7SL853P-201ENST00000617250 223 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 AC091812.1-201ENST00000432235 1948 ntBASIC3.22□□□□□ -1.89
VTA1Q9NP79 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
VTA1Q9NP79 AC138915.1-201ENST00000565427 1685 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VTA1Q9NP79 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VTA1Q9NP79 U3.9-201ENST00000363823 204 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 RNY3P4-201ENST00000384428 101 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 Y_RNA.551-201ENST00000384661 102 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 Y_RNA.557-201ENST00000384680 107 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 RNU6-823P-201ENST00000391042 103 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 MIR208B-201ENST00000401172 77 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 MIR1252-201ENST00000408861 65 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 SNORD109B-201ENST00000458961 67 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 SNORD109A-201ENST00000459128 67 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 RNU7-169P-201ENST00000459456 61 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 CYCSP23-201ENST00000519781 313 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 AC040926.1-201ENST00000530195 238 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 EIF4A1P12-201ENST00000551910 141 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 SNRPGP20-201ENST00000604477 205 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 PCGEM1.1-201ENST00000613431 131 ntBASIC3.21□□□□□ -1.9
VTA1Q9NP79 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VTA1Q9NP79 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VTA1Q9NP79 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.2□□□□□ -1.9
VTA1Q9NP79 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VTA1Q9NP79 RNU1-76P-201ENST00000362903 159 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 RNA5SP126-201ENST00000365092 109 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 MIR9-1-201ENST00000385198 89 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 RPL21P75-201ENST00000396599 483 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 RPL21P28-201ENST00000401418 483 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.2□□□□□ -1.9
VTA1Q9NP79 EIF1P2-201ENST00000428233 350 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 CHEK2P4-201ENST00000450340 246 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 RPL21P39-201ENST00000463605 483 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 RPL23AP70-201ENST00000483361 460 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC087190.1-201ENST00000484462 480 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC107032.1-201ENST00000485945 480 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC132942.1-201ENST00000486753 483 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC093591.1-201ENST00000491435 481 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 RPL21P16-201ENST00000495531 483 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AP002770.2-201ENST00000543613 532 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
VTA1Q9NP79 RPL30P11-203ENST00000598995 310 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 AC124312.5-201ENST00000604451 268 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.2□□□□□ -1.9
VTA1Q9NP79 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.2□□□□□ -1.9
VTA1Q9NP79 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.2□□□□□ -1.9
VTA1Q9NP79 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
VTA1Q9NP79 SNORD21-201ENST00000383953 95 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 Y_RNA.459-201ENST00000384251 102 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 RNU6-1093P-201ENST00000391194 107 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AL138827.1-201ENST00000402666 306 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
VTA1Q9NP79 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms