Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-769P-201ENST00000384407 104 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 MTATP6P20-201ENST00000414147 562 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 USP9YP14-201ENST00000430663 563 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC145146.1-201ENST00000496370 254 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-377P-201ENST00000515965 102 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-1098P-201ENST00000516772 96 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AL121579.1-201ENST00000555129 305 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 CYP4A27P-201ENST00000567218 190 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC008088.1-201ENST00000580993 280 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 MIR3118-1-201ENST00000581787 76 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 HMGN1P30-201ENST00000589286 268 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC104458.1-201ENST00000608243 463 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RMST_7.1-201ENST00000621935 268 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC013437.2-201ENST00000639587 677 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 AL391994.1-201ENST00000254724 282 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 SNORD32B-201ENST00000364460 84 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-641P-201ENST00000384006 107 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-1026P-201ENST00000384465 108 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 MIR605-201ENST00000385078 83 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 RNA5SP467-201ENST00000391274 118 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 SNORD99-201ENST00000408612 74 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 AL031779.1-201ENST00000415663 330 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 ELOCP4-201ENST00000420090 333 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 AC078809.1-201ENST00000427601 140 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 RPL39P38-201ENST00000467018 153 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 SNORA19.3-201ENST00000516165 130 ntBASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.38□□□□□ -2.35
KIAA1549Q9HCM3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC005534.2-201ENST00000431047 433 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 MTND3P1-201ENST00000441336 220 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 MTND1P12-201ENST00000455231 147 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC105758.1-201ENST00000506038 399 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 PDCD5P2-201ENST00000507570 312 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AP003168.1-201ENST00000530091 307 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC090888.2-201ENST00000559765 1144 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 CTHRC1P1-201ENST00000605383 469 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC021506.2-201ENST00000612354 169 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 Z69720.2-201ENST00000624755 279 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-562P-201ENST00000362731 107 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 RNU4-1-201ENST00000363925 141 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 Y_RNA.480-201ENST00000384364 102 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 SNORD115.1-201ENST00000391109 76 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 RPL23AP95-201ENST00000426806 265 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 RPL37P21-201ENST00000435890 276 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 RPL22P17-201ENST00000438729 315 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC112206.4-201ENST00000515142 405 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC015688.6-201ENST00000577737 104 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 SNORA59B-202ENST00000578183 701 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AL031667.3-201ENST00000620124 655 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 AC004808.1-201ENST00000627671 721 ntBASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.37□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-428P-201ENST00000362942 107 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 Y_RNA.97-201ENST00000363094 102 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 SNORD56.2-201ENST00000363242 71 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 SNORA4.2-201ENST00000365313 147 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-110P-201ENST00000384508 104 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-950P-201ENST00000384651 107 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 MIR1283-1-201ENST00000408494 87 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-607P-201ENST00000411283 108 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-387P-201ENST00000411331 105 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC114482.1-201ENST00000418010 247 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC007283.2-201ENST00000424739 197 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RPS20P10-201ENST00000451209 253 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AL157398.1-201ENST00000452981 186 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC007547.1-201ENST00000462177 490 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 HMGN1P12-201ENST00000499125 195 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-1041P-201ENST00000516254 102 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC007834.2-201ENST00000536310 343 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 EIF4A1P12-201ENST00000551910 141 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 PCMTD1P2-201ENST00000565017 355 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC078795.3-201ENST00000602913 472 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 AC040896.1-201ENST00000613819 479 ntBASIC0.36□□□□□ -2.35
KIAA1549Q9HCM3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms