Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-1314P-201ENST00000517139 104 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC034114.1-201ENST00000520293 285 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AP000763.2-201ENST00000540641 163 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 HSPE1P4-201ENST00000550617 308 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AC078795.3-201ENST00000602913 472 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AL034555.1-201ENST00000604816 211 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 SNORD98-201ENST00000636377 67 ntBASIC1.89□□□□□ -2.11
RNF41Q9H4P4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RNF41Q9H4P4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF41Q9H4P4 SNORD32B-201ENST00000364460 84 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 RNU6-128P-201ENST00000383976 107 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.414-201ENST00000384011 101 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 MIR29B2-201ENST00000385055 81 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 RNA5SP201-201ENST00000410316 124 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 RN7SKP158-201ENST00000410453 326 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 RNU6-325P-201ENST00000411132 105 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AL590135.1-201ENST00000422215 156 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC019205.3-201ENST00000424573 156 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC016700.2-201ENST00000446011 156 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 SNRPGP7-201ENST00000469016 106 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC015911.1-201ENST00000495111 156 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 CKS1BP2-201ENST00000497342 240 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF41Q9H4P4 RNU6-256P-201ENST00000516747 97 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 MTND4LP26-201ENST00000518144 282 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC118273.2-201ENST00000532092 465 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC026371.1-201ENST00000551867 419 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 MIR3136-201ENST00000583498 78 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 MIR3942-201ENST00000585264 109 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC092794.1-201ENST00000612734 582 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AL353997.5-201ENST00000618886 171 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC006504.8-201ENST00000621046 635 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 AC090517.3-201ENST00000625170 141 ntBASIC1.88□□□□□ -2.11
RNF41Q9H4P4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF41Q9H4P4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RNF41Q9H4P4 RNU6-227P-201ENST00000362865 103 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.157-201ENST00000363638 102 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 SNORA36A-201ENST00000384221 132 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 RNU6-95P-201ENST00000384697 107 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 MTCYBP2-201ENST00000407745 171 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 RNU2-32P-201ENST00000411193 191 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 AL590632.1-201ENST00000424289 371 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF41Q9H4P4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 RNU7-187P-201ENST00000458985 68 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 AC005741.1-201ENST00000511094 432 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 RNU6-864P-201ENST00000516256 108 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.87□□□□□ -2.11
RNF41Q9H4P4 AC008749.1-201ENST00000597650 306 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 MIR1248-201ENST00000629190 106 ntBASIC1.87□□□□□ -2.11
RNF41Q9H4P4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC092268.1-201ENST00000342691 405 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.212-201ENST00000364177 102 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 RNU6-546P-201ENST00000383991 107 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 EDDM3CP-201ENST00000415977 425 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 CBX3P6-201ENST00000430257 527 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC145146.1-201ENST00000496370 254 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 TRBVA-201ENST00000498804 316 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC016632.1-201ENST00000503994 196 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 SNORA4.4-201ENST00000515921 135 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 RNU6-667P-201ENST00000517186 102 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC022616.8-201ENST00000533569 253 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC023043.2-201ENST00000589678 1026 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AL133215.3-201ENST00000609801 448 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC100810.6-201ENST00000638068 285 ntBASIC1.86□□□□□ -2.11
RNF41Q9H4P4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.301-201ENST00000364990 103 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 SNORD116-11-201ENST00000383882 92 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 RNU6-611P-201ENST00000384276 104 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 RNU6-1106P-201ENST00000390845 107 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
RNF41Q9H4P4 SNORA12-201ENST00000391162 147 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms