Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC025253.1-201ENST00000613623 543 ntBASIC2.53□□□□□ -2
USP44Q9H0E7 AC005520.5-201ENST00000613926 164 ntBASIC2.53□□□□□ -2
USP44Q9H0E7 Y_RNA.804-201ENST00000615262 101 ntBASIC2.53□□□□□ -2
USP44Q9H0E7 AC090517.3-201ENST00000625170 141 ntBASIC2.53□□□□□ -2
USP44Q9H0E7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
USP44Q9H0E7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USP44Q9H0E7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USP44Q9H0E7 Y_RNA.474-201ENST00000384341 102 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 RNU6-790P-201ENST00000384479 105 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 RNU4-14P-201ENST00000410858 122 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 EIF4EP2-201ENST00000422816 654 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 MTND3P9-201ENST00000429526 346 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 RPL23AP7-203ENST00000449021 469 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 AC107399.1-201ENST00000451226 265 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.52□□□□□ -2.01
USP44Q9H0E7 AL353752.1-201ENST00000454946 260 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.52□□□□□ -2.01
USP44Q9H0E7 SNRPGP7-201ENST00000469016 106 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
USP44Q9H0E7 AC091874.1-201ENST00000511402 339 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.52□□□□□ -2.01
USP44Q9H0E7 MIR3976-201ENST00000606807 139 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 AC009318.2-201ENST00000610917 651 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 MIR6128-201ENST00000615528 109 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 ZNF355P-201ENST00000427301 3216 ntBASIC2.52□□□□□ -2.01
USP44Q9H0E7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP44Q9H0E7 Y_RNA.263-201ENST00000364659 114 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 RNU6-1286P-201ENST00000383871 107 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 MIR521-1-201ENST00000384902 87 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USP44Q9H0E7 AC012306.1-201ENST00000423267 114 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 SNRPEP8-201ENST00000442866 260 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.51□□□□□ -2.01
USP44Q9H0E7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.51□□□□□ -2.01
USP44Q9H0E7 AL021397.1-201ENST00000451806 248 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 YWHAEP4-201ENST00000505390 198 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 RNU1-54P-201ENST00000517181 120 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.51□□□□□ -2.01
USP44Q9H0E7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.51□□□□□ -2.01
USP44Q9H0E7 RPS3AP23-202ENST00000574601 686 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 AL132765.2-201ENST00000610812 351 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 AC063943.3-201ENST00000615562 356 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.51□□□□□ -2.01
USP44Q9H0E7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.51□□□□□ -2.01
USP44Q9H0E7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.51□□□□□ -2.01
USP44Q9H0E7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 RNU4-15P-201ENST00000362613 141 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 RNU6-611P-201ENST00000384276 104 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 Y_RNA.529-201ENST00000384586 119 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 AL591034.2-201ENST00000402839 359 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 RPL37P10-201ENST00000412884 288 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 RPS26P42-201ENST00000413485 326 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 AC093019.1-201ENST00000443135 252 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 FTH1P25-201ENST00000447665 469 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 AC116337.1-201ENST00000509680 687 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 RNU6-277P-201ENST00000516272 106 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 AC022616.8-201ENST00000533569 253 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 CYCSP26-201ENST00000534107 320 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
USP44Q9H0E7 SNORA43.4-201ENST00000629559 138 ntBASIC2.5□□□□□ -2.01
USP44Q9H0E7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP44Q9H0E7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP44Q9H0E7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 U3.9-201ENST00000363823 204 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 SNORA40.19-201ENST00000390846 128 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 MIR1294-201ENST00000408503 142 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 Z82205.1-201ENST00000428456 297 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.49□□□□□ -2.01
USP44Q9H0E7 FGF7P4-201ENST00000509595 295 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 Z98751.3-201ENST00000604447 521 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 AC016727.1-205ENST00000605437 569 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 AL450472.1-202ENST00000637286 180 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 AC112487.2-201ENST00000637950 304 ntBASIC2.49□□□□□ -2.01
USP44Q9H0E7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.49□□□□□ -2.01
USP44Q9H0E7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP44Q9H0E7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP44Q9H0E7 Y_RNA.123-201ENST00000363338 102 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 RNU6-1059P-201ENST00000363752 98 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 Y_RNA.356-201ENST00000365475 113 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 SNORA25B-201ENST00000365507 128 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.48□□□□□ -2.01
USP44Q9H0E7 RNU6-968P-201ENST00000384076 107 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 Y_RNA.473-201ENST00000384333 102 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 RNA5SP201-201ENST00000410316 124 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms