Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 AC110774.1-201ENST00000623567 2018 ntBASIC3.1□□□□□ -1.91
SSBP3Q9BWW4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 RNU1-18P-201ENST00000363062 164 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 Y_RNA.542-201ENST00000384641 111 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 Z98941.1-201ENST00000407764 100 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AC010154.1-201ENST00000425857 269 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 SNORA71B-202ENST00000439232 272 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 HMGN2P7-201ENST00000456186 273 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 RN7SL93P-201ENST00000463035 293 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 RPS27AP10-201ENST00000496103 208 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AC005921.1-201ENST00000510589 286 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 RNU4-57P-201ENST00000515980 135 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AC109810.1-201ENST00000534066 224 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 SNORA51-201ENST00000606420 132 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 AC011603.4-201ENST00000611325 277 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 MIR3658-201ENST00000636291 56 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 SNORD98-201ENST00000636377 67 ntBASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSBP3Q9BWW4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SSBP3Q9BWW4 AL353746.1-201ENST00000566293 6881 ntBASIC3.09□□□□□ -1.92
SSBP3Q9BWW4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SSBP3Q9BWW4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SSBP3Q9BWW4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 SNORA31-201ENST00000362607 130 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 RNU6-622P-201ENST00000384272 103 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 MIR449B-201ENST00000384995 97 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 SNORA26.5-201ENST00000391215 123 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 HMGN2P8-201ENST00000391458 268 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AC006461.1-201ENST00000412637 326 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AC026403.1-201ENST00000518938 295 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AC074050.1-201ENST00000563247 211 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 MIR3923-201ENST00000579521 83 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AL391261.4-201ENST00000616012 481 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 U7.8-201ENST00000619968 63 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 AP000553.6-201ENST00000641242 118 ntBASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
SSBP3Q9BWW4 Y_RNA.24-201ENST00000362508 103 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 RNU4-10P-201ENST00000364383 140 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 RNA5SP189-201ENST00000364920 115 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 SNORD6-201ENST00000365444 73 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 YPEL5P1-201ENST00000419731 367 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 HMGN2P10-201ENST00000448085 265 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AL121914.1-201ENST00000450188 156 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 RNU7-170P-201ENST00000459303 61 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 TRBV12-2-201ENST00000489763 344 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AP004242.1-201ENST00000533701 349 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AC021739.1-201ENST00000559631 174 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AC011471.1-201ENST00000585766 187 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AC005520.5-201ENST00000613926 164 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 MIR6075-201ENST00000620782 95 ntBASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSBP3Q9BWW4 RNU6-50P-201ENST00000362356 103 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 RNU6-454P-201ENST00000364292 107 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 RNA5SP51-201ENST00000364750 119 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 Y_RNA.415-201ENST00000384012 112 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 AL031003.1-201ENST00000404229 172 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 AL355497.1-201ENST00000406262 551 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 AC084357.1-201ENST00000473404 255 ntBASIC3.06□□□□□ -1.92
SSBP3Q9BWW4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms