Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
NDC1Q9BTX1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 RNU1-70P-201ENST00000362618 164 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 RNU6-1010P-201ENST00000362757 107 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 RNU6-280P-201ENST00000364145 104 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 RNU4-56P-201ENST00000364700 142 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.274-201ENST00000364714 101 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 RNU6-1145P-201ENST00000384246 107 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 RNA5SP354-201ENST00000391247 136 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 CST9LP2-201ENST00000437612 320 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 PRELID3BP1-201ENST00000457142 540 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 AC090525.1-201ENST00000479116 478 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 AIG1P1-201ENST00000503376 148 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 SEPT14P8-201ENST00000508026 178 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 PHBP14-201ENST00000512887 367 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 SNORA31.16-201ENST00000516773 139 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.700-201ENST00000516806 100 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 RRN3P3-201ENST00000549207 578 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 MIR3136-201ENST00000583498 78 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 SNORD113-5-201ENST00000607261 78 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 U2.14-201ENST00000615943 113 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 AC127459.3-201ENST00000624328 466 ntBASIC3.08□□□□□ -1.92
NDC1Q9BTX1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NDC1Q9BTX1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RNA5SP374-201ENST00000362939 125 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RNU6-626P-201ENST00000363354 107 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RNU6-961P-201ENST00000363893 105 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.297-201ENST00000364950 91 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AL033519.2-201ENST00000403958 392 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RNA5SP293-201ENST00000410527 113 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RNU5A-5P-201ENST00000411054 116 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AL139156.1-201ENST00000412785 841 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 MTND2P29-201ENST00000438595 412 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AL136097.1-201ENST00000456945 913 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RN7SL863P-201ENST00000462370 296 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AC073901.1-201ENST00000462471 408 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RPS27P29-201ENST00000463110 252 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 SNORD59.2-201ENST00000516873 68 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AK6P2-201ENST00000549020 471 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 MIR4423-201ENST00000580922 80 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 MIR4325-201ENST00000583049 90 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 AL162274.2-201ENST00000614406 332 ntBASIC3.07□□□□□ -1.92
NDC1Q9BTX1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NDC1Q9BTX1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.29-201ENST00000362570 113 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 RNU6-873P-201ENST00000363833 107 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 RNU6-20P-201ENST00000384106 107 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 AC010095.1-201ENST00000443543 144 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 AP001324.2-201ENST00000461163 319 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 RNU7-110P-201ENST00000516891 62 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 uc_338.14-201ENST00000613162 166 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 SNORD98-201ENST00000636377 67 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NDC1Q9BTX1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
NDC1Q9BTX1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.200-201ENST00000364018 102 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms