Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RPS27AP9-201ENST00000477681 438 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 RPL30P10-201ENST00000488148 337 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 AC016632.1-201ENST00000503994 196 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 MRPS36P2-201ENST00000512569 299 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 RNA5SP112-201ENST00000515937 99 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.700-201ENST00000516806 100 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 U2.22-201ENST00000636441 106 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 Z75746.1-201ENST00000440243 2080 ntBASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN3Q9BTN0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AC010329.5-201ENST00000623497 2174 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AC092268.1-201ENST00000342691 405 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 SNORD50.1-201ENST00000362987 71 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.237-201ENST00000364439 102 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.458-201ENST00000384240 102 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 RN7SKP61-201ENST00000410642 295 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 RPL23AP95-201ENST00000426806 265 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AL139109.1-201ENST00000455491 297 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 PRELID3BP1-201ENST00000457142 540 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 RN7SL93P-201ENST00000463035 293 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 SNORA81.3-201ENST00000517283 198 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AC079600.2-201ENST00000550076 130 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AC130289.1-201ENST00000577321 73 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 MIR3186-201ENST00000577404 85 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 MIR4765-201ENST00000585007 77 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 FTX_2.1-201ENST00000618816 94 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 AC009487.2-201ENST00000420969 6821 ntBASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN3Q9BTN0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC073073.2-201ENST00000609827 2578 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 MIR335-201ENST00000362173 94 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.27-201ENST00000362540 103 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 snoU2_19.2-201ENST00000363024 80 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.123-201ENST00000363338 102 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 SDAD1P3-201ENST00000427380 333 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC067942.3-201ENST00000512025 362 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 RNA5SP445-201ENST00000515889 115 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 RNU6-789P-201ENST00000517105 102 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC093331.1-201ENST00000521474 169 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC079598.5-201ENST00000547460 117 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 KLKP1-201ENST00000595979 403 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC009318.2-201ENST00000610917 651 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC002064.3-201ENST00000623448 346 ntBASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LRFN3Q9BTN0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AL157777.2-201ENST00000258070 137 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AL391987.6-201ENST00000305671 199 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 RNU6-486P-201ENST00000363116 107 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.180-201ENST00000363867 113 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 RNU4-56P-201ENST00000364700 142 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 SNORD32A-201ENST00000364805 84 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 MIR1287-201ENST00000408492 90 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 RNU2-52P-201ENST00000410680 190 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AC096920.1-201ENST00000423991 241 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AC079354.2-201ENST00000453523 154 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 RPL30P12-201ENST00000474666 353 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 RPS29P21-201ENST00000496272 170 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AC010469.2-201ENST00000496412 480 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 RNA5SP458-201ENST00000516188 119 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 RN7SKP272-201ENST00000516988 232 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AC026333.2-201ENST00000542164 106 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 HSPE1P4-201ENST00000550617 308 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 AC092628.2-201ENST00000622492 339 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN3Q9BTN0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.29-201ENST00000362570 113 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms