Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 CYP2C61P-201ENST00000604072 290 ntBASIC1.57□□□□□ -2.16
KLHDC3Q9BQ90 AC064807.4-201ENST00000607201 407 ntBASIC1.57□□□□□ -2.16
KLHDC3Q9BQ90 AL022345.1-201ENST00000607292 135 ntBASIC1.57□□□□□ -2.16
KLHDC3Q9BQ90 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
KLHDC3Q9BQ90 MIR1321-201ENST00000637766 79 ntBASIC1.57□□□□□ -2.16
KLHDC3Q9BQ90 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 RNU4-42P-201ENST00000364738 142 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 Y_RNA.332-201ENST00000365271 113 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 Y_RNA.372-201ENST00000365599 102 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 SNORA36A-201ENST00000384221 132 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 MIR181A1-201ENST00000385026 110 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 MIR504-201ENST00000385065 83 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 VN1R36P-201ENST00000414936 291 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC012306.1-201ENST00000423267 114 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC007677.1-201ENST00000445757 515 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC007547.1-201ENST00000462177 490 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC010525.2-201ENST00000590920 195 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 RPL17P51-201ENST00000605218 238 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC009994.1-201ENST00000606889 253 ntBASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.56□□□□□ -2.16
KLHDC3Q9BQ90 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 RNY3P3-201ENST00000363816 102 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-1317P-201ENST00000364582 104 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-128P-201ENST00000383976 107 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-378P-201ENST00000384324 107 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 SNORA8-201ENST00000384574 139 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 MIR597-201ENST00000384968 97 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 MIR208B-201ENST00000401172 77 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 AL590002.1-201ENST00000406554 418 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 MTND3P9-201ENST00000429526 346 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 FTH1P25-201ENST00000447665 469 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 HMGN2P18-201ENST00000450680 270 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 AC021146.2-201ENST00000504736 556 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-314P-201ENST00000516574 104 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 AC087441.2-201ENST00000529141 262 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 FAM157A-202ENST00000615155 405 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 U1.36-201ENST00000620684 176 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 AC233981.2-201ENST00000611524 1614 ntBASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-451P-201ENST00000362921 107 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-23P-201ENST00000363283 107 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 RNU4-40P-201ENST00000364351 143 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 MIR450B-201ENST00000401182 78 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 EIF4EP2-201ENST00000422816 654 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 NDUFA5P4-201ENST00000436704 385 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AL035666.1-201ENST00000446195 348 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AMD1P1-201ENST00000457220 922 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AC083904.1-201ENST00000487828 231 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 MTCO1P29-201ENST00000496868 288 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 TRBVA-201ENST00000498804 316 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AC092436.3-201ENST00000511788 257 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 Y_RNA.665-201ENST00000516177 98 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-1332P-201ENST00000516666 104 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AP005660.1-201ENST00000522972 293 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AC109635.3-201ENST00000529536 185 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AC093783.1-201ENST00000612976 329 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 AC130454.1-201ENST00000622948 401 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
KLHDC3Q9BQ90 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 SNORD113-7-201ENST00000363762 77 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 Y_RNA.256-201ENST00000364594 104 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 RNA5SP213-201ENST00000391031 106 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 RNU2-41P-201ENST00000410991 178 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 RNU6-325P-201ENST00000411132 105 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 RPS20P15-201ENST00000412792 311 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 SNRPEP10-201ENST00000420249 274 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AC123900.1-201ENST00000420390 96 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AL591806.2-201ENST00000433122 173 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 HMGN2P23-201ENST00000456759 269 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 HMGN2P26-201ENST00000463169 339 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 AC090517.1-201ENST00000569307 266 ntBASIC1.53□□□□□ -2.16
KLHDC3Q9BQ90 EIF1P4-201ENST00000572664 335 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms