Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 Y_RNA.358-201ENST00000365491 99 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 Y_RNA.405-201ENST00000383979 100 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 Y_RNA.451-201ENST00000384200 100 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 Y_RNA.524-201ENST00000384564 100 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 Y_RNA.561-201ENST00000384694 100 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 MIR215-201ENST00000384858 110 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 Y_RNA.592-201ENST00000410274 109 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 RNA5SP425-201ENST00000410336 112 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 SNRPEP9-201ENST00000436794 238 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 Z98949.2-201ENST00000440996 144 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AL078601.1-201ENST00000444542 271 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AC096638.1-201ENST00000444678 216 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 SNORD127-201ENST00000458892 86 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 RNU6-1132P-201ENST00000459214 107 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 RNU7-87P-201ENST00000459343 62 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.68□□□□□ -1.98
MEIS3Q99687 AC010469.2-201ENST00000496412 480 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 MTND4LP22-201ENST00000508209 276 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.68□□□□□ -1.98
MEIS3Q99687 RNU6-408P-201ENST00000515910 100 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 SNORA25.11-201ENST00000515935 105 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 RNU6-377P-201ENST00000515965 102 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 MRPS36P4-201ENST00000534436 298 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.68□□□□□ -1.98
MEIS3Q99687 TRAV28-201ENST00000557548 323 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.68□□□□□ -1.98
MEIS3Q99687 VN1R91P-201ENST00000594377 169 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AL109918.3-201ENST00000603072 338 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AC016727.2-201ENST00000603988 621 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 MIR8076-201ENST00000611401 83 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AL159153.1-201ENST00000619688 317 ntBASIC2.68□□□□□ -1.98
MEIS3Q99687 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.68□□□□□ -1.98
MEIS3Q99687 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MEIS3Q99687 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MEIS3Q99687 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MEIS3Q99687 RNU6-770P-201ENST00000363929 105 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 Y_RNA.288-201ENST00000364854 92 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 RNU5E-7P-201ENST00000365290 117 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 RNU6-741P-201ENST00000383889 107 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 Y_RNA.471-201ENST00000384312 102 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 RNU6-140P-201ENST00000384566 108 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 Y_RNA.556-201ENST00000384677 113 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 SNORA69.1-201ENST00000390904 137 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 TOMM20P4-201ENST00000427861 435 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AL356867.1-201ENST00000429623 299 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AC009237.8-201ENST00000445492 379 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 NDUFB1P2-201ENST00000449477 176 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.67□□□□□ -1.98
MEIS3Q99687 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.67□□□□□ -1.98
MEIS3Q99687 LINC01399-202ENST00000458450 244 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 U8.21-201ENST00000459536 136 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 TRBV12-1-201ENST00000479785 344 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 Y_RNA.673-201ENST00000516306 88 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AC109329.1-201ENST00000518744 317 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AP002770.2-201ENST00000543613 532 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.67□□□□□ -1.98
MEIS3Q99687 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.67□□□□□ -1.98
MEIS3Q99687 AC010900.2-201ENST00000604508 210 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AC096772.1-201ENST00000609146 564 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AC013412.1-201ENST00000610687 192 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 AC005336.3-201ENST00000623833 2679 ntBASIC2.67□□□□□ -1.98
MEIS3Q99687 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.66□□□□□ -1.98
MEIS3Q99687 AC090740.1-201ENST00000623193 2262 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
MEIS3Q99687 Y_RNA.152-201ENST00000363578 100 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 Y_RNA.257-201ENST00000364596 102 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 RNU6-898P-201ENST00000365627 104 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 RNU6-72P-201ENST00000384285 79 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 Y_RNA.551-201ENST00000384661 102 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 MIR628-201ENST00000385229 95 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 RNU6-700P-201ENST00000391043 107 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MEIS3Q99687 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 MIR1302-6-201ENST00000408466 90 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 SNORA11.4-201ENST00000408823 129 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 RNU2-20P-201ENST00000410425 191 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 AL139156.1-201ENST00000412785 841 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.66□□□□□ -1.98
MEIS3Q99687 AC007098.1-201ENST00000420122 367 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MEIS3Q99687 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MEIS3Q99687 AC073910.1-201ENST00000445047 438 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 AC013470.1-201ENST00000453438 462 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 TOMM22P6-201ENST00000465035 409 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 HMGB1P35-201ENST00000503360 598 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 HMGB3P17-201ENST00000504195 649 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 AC091874.1-201ENST00000511402 339 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.66□□□□□ -1.98
MEIS3Q99687 SNORA40.15-201ENST00000516884 107 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 AC144568.1-201ENST00000520139 137 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.66□□□□□ -1.98
MEIS3Q99687 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
MEIS3Q99687 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.66□□□□□ -1.98
MEIS3Q99687 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.66□□□□□ -1.98
MEIS3Q99687 Z82195.2-201ENST00000612348 18351 ntBASIC2.65□□□□□ -1.98
MEIS3Q99687 RNU6-658P-201ENST00000384606 106 ntBASIC2.65□□□□□ -1.99
MEIS3Q99687 SNORA48.3-201ENST00000391081 134 ntBASIC2.65□□□□□ -1.99
MEIS3Q99687 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.65□□□□□ -1.99
MEIS3Q99687 AL135786.1-201ENST00000415892 214 ntBASIC2.65□□□□□ -1.99
MEIS3Q99687 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms