Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AP003072.2-201ENST00000527756 676 ntBASIC0.1□□□□□ -2.39
CCDC115Q96NT0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.1□□□□□ -2.39
CCDC115Q96NT0 MIR4514-201ENST00000581410 57 ntBASIC0.1□□□□□ -2.39
CCDC115Q96NT0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.1□□□□□ -2.39
CCDC115Q96NT0 AL357312.1-201ENST00000603879 298 ntBASIC0.1□□□□□ -2.39
CCDC115Q96NT0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CCDC115Q96NT0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 RNU6-462P-201ENST00000362659 105 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 SNORA33-201ENST00000363664 130 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 RNU6-1141P-201ENST00000364520 107 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 Y_RNA.311-201ENST00000365068 96 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CCDC115Q96NT0 SNORD41-201ENST00000386967 70 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 SNORD89-201ENST00000390981 114 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 SNORA75.2-201ENST00000391138 150 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 SNORA75.3-201ENST00000391231 150 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 RN7SKP200-201ENST00000410564 320 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 RPL17P35-201ENST00000432217 549 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 SNORA62.5-201ENST00000516634 120 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 AL031775.1-201ENST00000607014 887 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 AC245297.2-201ENST00000610119 565 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 PCGEM1.1-201ENST00000613431 131 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 AC136475.10-201ENST00000620253 385 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 AL513423.1-201ENST00000621695 132 ntBASIC0.09□□□□□ -2.4
CCDC115Q96NT0 snoU2-30.2-201ENST00000362805 70 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 RNU4-76P-201ENST00000364509 141 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 RNU6-418P-201ENST00000384035 107 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 RNU6-45P-201ENST00000384471 107 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 MIR578-201ENST00000384828 96 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 MIR653-201ENST00000385279 96 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 Y_RNA.578-201ENST00000390903 88 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC000111.3-201ENST00000433478 193 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC244670.1-201ENST00000436879 112 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 DAP3P1-201ENST00000441522 278 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC007547.1-201ENST00000462177 490 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 RPS23P5-201ENST00000495419 428 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC021146.8-201ENST00000507455 733 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 RNU2-10P-201ENST00000516375 211 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 RNU6-751P-201ENST00000516382 101 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AP002453.2-201ENST00000533503 320 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AC016256.1-201ENST00000547971 354 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 BNIP3P26-201ENST00000600827 554 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 AL356157.2-201ENST00000605122 111 ntBASIC0.08□□□□□ -2.4
CCDC115Q96NT0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CCDC115Q96NT0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CCDC115Q96NT0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CCDC115Q96NT0 SNORA40.2-201ENST00000390847 128 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 AL034345.1-201ENST00000407768 123 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 USP9YP11-201ENST00000427537 717 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 MTND5P2-201ENST00000442927 1142 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 RNU6-1146P-201ENST00000516282 102 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 SNORA31.10-201ENST00000516482 106 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 AC106038.2-201ENST00000520706 568 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 EIF4A1P12-201ENST00000551910 141 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 MIR1273G-201ENST00000577677 100 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 AL596327.1-201ENST00000603629 213 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 AL603839.4-201ENST00000624658 1005 ntBASIC0.07□□□□□ -2.4
CCDC115Q96NT0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
CCDC115Q96NT0 RNU4-67P-201ENST00000364569 141 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 RPL22P18-201ENST00000417197 377 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC243964.1-201ENST00000441814 261 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AL133217.1-201ENST00000450980 425 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AL049829.1-201ENST00000465411 156 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 SNRPGP7-201ENST00000469016 106 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AK3P2-201ENST00000507976 429 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC112206.4-201ENST00000515142 405 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC090049.2-201ENST00000550377 109 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.06□□□□□ -2.4
CCDC115Q96NT0 TMF1P1-201ENST00000576058 373 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AL390123.1-201ENST00000603216 237 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 Z98751.3-201ENST00000604447 521 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC064872.1-201ENST00000604823 1072 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 AC097065.2-201ENST00000608159 533 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 U4.7-201ENST00000638126 106 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 MTND5P16-201ENST00000460269 1703 ntBASIC0.06□□□□□ -2.4
CCDC115Q96NT0 SNORA63.3-201ENST00000362682 132 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 RNU6-105P-201ENST00000363909 104 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.05□□□□□ -2.4
CCDC115Q96NT0 SNORA36.2-201ENST00000384004 127 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 RNU6-1067P-201ENST00000384752 107 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 AL451046.2-201ENST00000403074 277 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 AL355796.1-201ENST00000406706 323 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 AC078809.1-201ENST00000427601 140 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC115Q96NT0 HMGB1P29-201ENST00000505659 499 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 RNU1-86P-201ENST00000516108 154 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 RNU1-107P-201ENST00000516617 154 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 RNU6-1028P-201ENST00000517164 93 ntBASIC0.05□□□□□ -2.4
CCDC115Q96NT0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms