Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 GPM6BP1-201ENST00000446387 144 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 ELOCP24-201ENST00000456370 334 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 AC104629.2-201ENST00000468627 598 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 AC015724.1-201ENST00000478577 156 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.39□□□□□ -2.47
SPG11Q96JI7 RNU6-202P-201ENST00000515998 96 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 AF235103.2-201ENST00000525753 346 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 AC004217.3-201ENST00000551552 878 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.39□□□□□ -2.47
SPG11Q96JI7 RNU6-161P-201ENST00000363051 106 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RNU6-778P-201ENST00000363269 103 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RNA5SP517-201ENST00000364724 117 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 TPMTP2-201ENST00000414372 726 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC123900.1-201ENST00000420390 96 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RPL31P54-201ENST00000429803 370 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RBBP4P6-201ENST00000508098 202 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC093259.1-201ENST00000509755 300 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RNU6-488P-201ENST00000515918 99 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AP000763.2-201ENST00000540641 163 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 MIR4709-201ENST00000577272 72 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC080078.2-201ENST00000603766 501 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC006157.1-201ENST00000611750 366 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC107075.1-201ENST00000613695 314 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 SUGT1P1-201ENST00000379514 476 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 MIR649-201ENST00000384843 97 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 MIR644A-201ENST00000385262 94 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 MIR892B-201ENST00000401279 77 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPG11Q96JI7 TXNL1P1-201ENST00000429528 554 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.4□□□□□ -2.47
SPG11Q96JI7 STAG3L5P-204ENST00000443759 179 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RNU7-56P-201ENST00000458744 62 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC107297.1-201ENST00000459991 176 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC130509.1-201ENST00000464158 433 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AC131055.1-201ENST00000584626 316 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AL355073.2-201ENST00000612106 557 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 uc_338.16-201ENST00000621804 95 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 AL603839.4-201ENST00000624658 1005 ntBASIC-0.4□□□□□ -2.47
SPG11Q96JI7 RNA5SP93-201ENST00000362525 114 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RNU4-27P-201ENST00000410889 139 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 ELOCP14-201ENST00000428070 331 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.41□□□□□ -2.48
SPG11Q96JI7 ELOCP7-201ENST00000439968 331 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 MTCO3P43-201ENST00000440974 771 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 AC013828.1-201ENST00000481845 158 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RNA5SP268-201ENST00000516828 124 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 C1DP5-201ENST00000525775 383 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 AP003716.2-201ENST00000528260 108 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.41□□□□□ -2.48
SPG11Q96JI7 AC040926.1-201ENST00000530195 238 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 AC027288.2-201ENST00000553028 243 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 MIR3115-201ENST00000577915 68 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 AC104695.3-201ENST00000604052 296 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RNU6-87P-201ENST00000607561 108 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RNU6-94P-201ENST00000607728 107 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 MIR3666-201ENST00000607845 111 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RMST_4.1-201ENST00000616886 107 ntBASIC-0.41□□□□□ -2.48
SPG11Q96JI7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.41□□□□□ -2.48
SPG11Q96JI7 RNY4P16-201ENST00000364768 94 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 MIR186-201ENST00000384988 86 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 MIR1827-201ENST00000408549 66 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 RNU6-177P-201ENST00000411257 104 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 MTATP6P27-201ENST00000416987 621 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AL162725.1-201ENST00000435405 301 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPG11Q96JI7 RNU6-917P-201ENST00000516294 104 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 RNA5SP291-201ENST00000517222 105 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 RNU2-60P-201ENST00000517290 128 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AC027419.1-201ENST00000522976 328 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AP003400.6-201ENST00000624698 740 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.42□□□□□ -2.48
SPG11Q96JI7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 MIR4788-201ENST00000639104 80 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
SPG11Q96JI7 SNORD114-14-201ENST00000362723 75 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 RNU6-441P-201ENST00000384545 106 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 SNORA12.1-201ENST00000390873 148 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 SNORA12-201ENST00000391162 147 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 SNORA26-201ENST00000391286 122 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AC093303.1-201ENST00000514549 295 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AC074133.1-201ENST00000515696 183 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 SNORA70.12-201ENST00000516084 153 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 RNA5SP481-201ENST00000516814 122 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AC091163.3-201ENST00000518269 1144 ntBASIC-0.42□□□□□ -2.48
SPG11Q96JI7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms