Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SNORA25.10-201ENST00000515926 124 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC144568.1-201ENST00000520139 137 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC027176.1-201ENST00000560204 514 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC023824.2-201ENST00000566185 400 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 CYP4A27P-201ENST00000567218 190 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 MIR4635-201ENST00000583759 79 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 RPL12P50-201ENST00000603116 116 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AL670379.2-201ENST00000604983 252 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC069294.1-201ENST00000608397 350 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC087588.2-201ENST00000617667 426 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC006386.2-201ENST00000624491 75 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC012005.1-201ENST00000624575 75 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.03□□□□□ -1.93
CDK5RAP3Q96JB5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.106-201ENST00000363189 100 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 RNU4-42P-201ENST00000364738 142 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-17P-201ENST00000384245 107 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-18P-201ENST00000384527 107 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-1072P-201ENST00000384703 107 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-443P-201ENST00000384780 107 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 SNORA69.1-201ENST00000390904 137 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 AC112220.1-201ENST00000434628 355 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 AL118496.2-201ENST00000448300 230 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 OR2AQ1P-201ENST00000451972 200 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 RPS27AP9-201ENST00000477681 438 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-826P-201ENST00000516827 104 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 AC109329.2-201ENST00000519658 482 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 AC105245.1-201ENST00000581934 244 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 ELOCP29-201ENST00000588193 334 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 MTND4P1-201ENST00000457501 1466 ntBASIC3.02□□□□□ -1.93
CDK5RAP3Q96JB5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.80-201ENST00000362996 102 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-1032P-201ENST00000384100 107 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.485-201ENST00000384395 102 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 MIR487A-201ENST00000385009 80 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 MIR208B-201ENST00000401172 77 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 SUMO1P4-201ENST00000429430 302 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC025750.2-201ENST00000442609 450 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 RPS3P1-201ENST00000456781 192 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 RNU4-77P-201ENST00000516692 156 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC079600.2-201ENST00000550076 130 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC023043.3-201ENST00000593113 385 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 MIR7106-201ENST00000612419 65 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 AC090517.3-201ENST00000625170 141 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 ZNF72P-201ENST00000425869 1908 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.01□□□□□ -1.93
CDK5RAP3Q96JB5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 RNU4-15P-201ENST00000362613 141 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.358-201ENST00000365491 99 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 U8.10-201ENST00000384260 133 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-541P-201ENST00000384709 110 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-1093P-201ENST00000391194 107 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 U6atac.2-201ENST00000408644 118 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 CHEK2P4-201ENST00000450340 246 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 EEF1B2P7-201ENST00000451177 676 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 AC080013.2-201ENST00000460866 323 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 LARP7P3-201ENST00000579888 337 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 MIR4658-201ENST00000584344 65 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 AL449363.1-201ENST00000617815 186 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 AL606534.2-204ENST00000635008 178 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 MIR4272-201ENST00000635924 64 ntBASIC3□□□□□ -1.93
CDK5RAP3Q96JB5 MTND5P16-201ENST00000460269 1703 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-222P-201ENST00000362438 107 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.319-201ENST00000365138 92 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.422-201ENST00000384054 114 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-639P-201ENST00000384074 107 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 MIR9-1-201ENST00000385198 89 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 MRPL42P3-201ENST00000401492 326 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 RN7SL297P-201ENST00000483161 293 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AC145146.1-201ENST00000496370 254 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 ANXA2P1-201ENST00000505539 926 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 HSBP1P1-201ENST00000555205 166 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms