Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AL513124.1-201ENST00000450410 614 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 HMGN2P18-201ENST00000450680 270 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AC007215.1-201ENST00000464893 276 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 RNU6-1314P-201ENST00000517139 104 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AC109446.1-201ENST00000566172 220 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 MIR5089-201ENST00000580047 84 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AC080078.2-201ENST00000603766 501 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AC006504.8-201ENST00000621046 635 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 AC090617.10-201ENST00000624308 134 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 SCARNA15.3-201ENST00000626315 122 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 SCARNA4.1-201ENST00000628597 123 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 MIR219B-201ENST00000637023 88 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.49□□□□□ -2.17
RPUSD4Q96CM3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 MIR340-201ENST00000362125 95 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNU4-82P-201ENST00000362443 140 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNU6-562P-201ENST00000362731 107 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 SNORD31B-201ENST00000364977 69 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 XGY1-201ENST00000381172 446 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNU6-160P-201ENST00000384591 107 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 SNORA64-201ENST00000384674 134 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 MIR208B-201ENST00000401172 77 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNU2-20P-201ENST00000410425 191 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNU2-41P-201ENST00000410991 178 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC009161.1-201ENST00000417306 376 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 BX510359.4-201ENST00000423750 193 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AL035666.1-201ENST00000446195 348 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AL353705.4-201ENST00000449661 238 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC079354.2-201ENST00000453523 154 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC016925.1-201ENST00000458303 298 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNU7-187P-201ENST00000458985 68 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC010486.1-201ENST00000511793 424 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNU6-991P-201ENST00000516168 107 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 RNA5SP490-201ENST00000517141 136 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC026470.2-201ENST00000561492 181 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 MIR1273D-201ENST00000577266 86 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 MIR3618-201ENST00000580330 88 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 MIR4672-201ENST00000583126 81 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AP003465.2-201ENST00000602571 373 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 SNRPGP19-201ENST00000603826 189 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC137590.2-201ENST00000619709 240 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC073869.6-201ENST00000640656 341 ntBASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RPUSD4Q96CM3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 ZNF702P-202ENST00000434269 1966 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SNORD50.1-201ENST00000362987 71 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SNORA16.1-201ENST00000364597 132 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 RNU6-596P-201ENST00000365395 98 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SNORD116-11-201ENST00000383882 92 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SNORA32.2-201ENST00000384049 122 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 RNU6-968P-201ENST00000384076 107 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SNORA67.3-201ENST00000384366 140 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 RNU6-933P-201ENST00000384424 107 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SNORA8-201ENST00000384574 139 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 RNU6-192P-201ENST00000391253 100 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AL023284.1-201ENST00000403956 276 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AL033519.2-201ENST00000403958 392 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 RNA5SP425-201ENST00000410336 112 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 RNU6-1148P-201ENST00000410992 104 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC096638.1-201ENST00000444678 216 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AF186996.7-201ENST00000492781 209 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 ATP5EP1-201ENST00000510257 156 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 HSPE1P18-201ENST00000517602 280 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 MIR3169-201ENST00000578032 83 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC002553.4-201ENST00000616896 331 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 U1.36-201ENST00000620684 176 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 AC009033.1-201ENST00000624279 431 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 SCARNA4-201ENST00000629045 128 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 LINC02555-201ENST00000563933 1951 ntBASIC1.47□□□□□ -2.17
RPUSD4Q96CM3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP276-201ENST00000362580 94 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 SNORD115-8-201ENST00000363856 82 ntBASIC1.46□□□□□ -2.18
RPUSD4Q96CM3 SNORD115-38-201ENST00000365037 82 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms