Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 SNORA12-201ENST00000391162 147 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AL079342.2-201ENST00000403367 482 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TTC28Q96AY4 HLA-S-202ENST00000425174 53 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 SNAP23P1-201ENST00000433229 246 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 RPL18AP17-201ENST00000455326 198 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 RNU6-983P-201ENST00000516004 103 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 RNU5A-4P-201ENST00000516588 111 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 RNU6-1315P-201ENST00000517187 99 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC068790.6-201ENST00000602558 258 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AL136363.2-201ENST00000604173 851 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC018926.1-201ENST00000616335 435 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 MIR6738-201ENST00000619620 64 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TTC28Q96AY4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
TTC28Q96AY4 SNORA72.2-201ENST00000365028 127 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 MIR200A-201ENST00000384875 90 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AL049545.1-201ENST00000401856 572 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 BX664727.1-201ENST00000416024 466 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 SNORD126-201ENST00000459475 77 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC024589.1-201ENST00000512207 263 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 SNORA31.4-201ENST00000516049 129 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 SNORA70.22-201ENST00000517160 124 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 MIR5708-201ENST00000579723 85 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 MIR3136-201ENST00000583498 78 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AP001596.2-201ENST00000608410 312 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.21□□□□□ -2.38
TTC28Q96AY4 AL365204.3-201ENST00000612448 685 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 AL591926.4-201ENST00000616895 298 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 RNU6-1122P-201ENST00000384449 107 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 MIR520A-201ENST00000384862 85 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AL158050.1-201ENST00000416077 457 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC013262.1-201ENST00000426710 252 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 RAB28P5-201ENST00000427490 651 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 MTND1P3-201ENST00000484956 952 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC093809.1-201ENST00000509155 340 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 RNU6-583P-201ENST00000516012 92 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC040926.1-201ENST00000530195 238 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AL590705.4-201ENST00000532209 134 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC092325.1-201ENST00000566449 554 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC008088.1-201ENST00000580993 280 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC105148.1-201ENST00000604961 409 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 uc_338.34-201ENST00000617467 174 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC008147.4-201ENST00000617570 1204 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AL159153.1-201ENST00000619688 317 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC106858.1-201ENST00000637497 429 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 SNORD114-31-201ENST00000363219 75 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 RNU6-97P-201ENST00000363387 104 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 SNORA29-201ENST00000384183 140 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 RNU6-166P-201ENST00000384371 107 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 RNY4P36-201ENST00000391116 96 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 UBE2V1P10-201ENST00000414685 269 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 TXNL1P1-201ENST00000429528 554 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 snoU109.2-201ENST00000459316 135 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC114981.1-201ENST00000503897 678 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 RN7SKP164-201ENST00000516138 266 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 RNU6-572P-201ENST00000516724 80 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC104417.1-201ENST00000523974 751 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.2□□□□□ -2.38
TTC28Q96AY4 AC137800.2-201ENST00000574375 120 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 SCARNA4-202ENST00000625402 129 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 MIR6828-201ENST00000636181 60 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 MIR1322-201ENST00000638013 71 ntBASIC0.2□□□□□ -2.38
TTC28Q96AY4 SNORD18A-201ENST00000363753 72 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
TTC28Q96AY4 MIR1305-201ENST00000408300 86 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 RNA5SP390-201ENST00000410191 113 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 TIMM9P1-201ENST00000436122 256 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 RPS26P48-201ENST00000491713 339 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 HMGB1P28-201ENST00000507778 552 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 SNORD60.2-201ENST00000516883 86 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 AL391001.1-201ENST00000602747 715 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AC069114.2-201ENST00000604699 304 ntBASIC0.19□□□□□ -2.38
TTC28Q96AY4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.19□□□□□ -2.38
TTC28Q96AY4 CDR1-202ENST00000625883 1485 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms