Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP13Q92995 Y_RNA.128-201ENST00000363391 112 ntBASIC2.66□□□□□ -1.98
USP13Q92995 Y_RNA.146-201ENST00000363549 102 ntBASIC2.66□□□□□ -1.98
USP13Q92995 Y_RNA.404-201ENST00000383978 102 ntBASIC2.66□□□□□ -1.98
USP13Q92995 RNU1-148P-201ENST00000384472 162 ntBASIC2.66□□□□□ -1.98
USP13Q92995 MIR518C-201ENST00000384822 101 ntBASIC2.66□□□□□ -1.98
USP13Q92995 MIR27B-201ENST00000385129 97 ntBASIC2.66□□□□□ -1.98
USP13Q92995 MIR559-201ENST00000385188 96 ntBASIC2.66□□□□□ -1.98
USP13Q92995 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
USP13Q92995 SNORA75.4-201ENST00000391278 119 ntBASIC2.66□□□□□ -1.98
USP13Q92995 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.66□□□□□ -1.98
USP13Q92995 EIF1AXP1-201ENST00000419267 435 ntBASIC2.66□□□□□ -1.98
USP13Q92995 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.66□□□□□ -1.98
USP13Q92995 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP13Q92995 AP000705.1-201ENST00000454567 350 ntBASIC2.66□□□□□ -1.98
USP13Q92995 ELOCP24-201ENST00000456370 334 ntBASIC2.66□□□□□ -1.98
USP13Q92995 SNORA4.4-201ENST00000515921 135 ntBASIC2.66□□□□□ -1.98
USP13Q92995 RNU6-567P-201ENST00000516746 107 ntBASIC2.66□□□□□ -1.98
USP13Q92995 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.66□□□□□ -1.98
USP13Q92995 CYCSP26-201ENST00000534107 320 ntBASIC2.66□□□□□ -1.98
USP13Q92995 MIR3923-201ENST00000579521 83 ntBASIC2.66□□□□□ -1.98
USP13Q92995 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.66□□□□□ -1.98
USP13Q92995 AC078795.3-201ENST00000602913 472 ntBASIC2.66□□□□□ -1.98
USP13Q92995 AP000654.2-201ENST00000605633 586 ntBASIC2.66□□□□□ -1.98
USP13Q92995 SNORD14A-201ENST00000606526 91 ntBASIC2.66□□□□□ -1.98
USP13Q92995 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP13Q92995 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.66□□□□□ -1.98
USP13Q92995 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
USP13Q92995 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP13Q92995 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
USP13Q92995 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP13Q92995 Y_RNA.31-201ENST00000362574 102 ntBASIC2.65□□□□□ -1.99
USP13Q92995 RNU4-15P-201ENST00000362613 141 ntBASIC2.65□□□□□ -1.99
USP13Q92995 Y_RNA.123-201ENST00000363338 102 ntBASIC2.65□□□□□ -1.99
USP13Q92995 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
USP13Q92995 Y_RNA.151-201ENST00000363566 112 ntBASIC2.65□□□□□ -1.99
USP13Q92995 Y_RNA.162-201ENST00000363683 102 ntBASIC2.65□□□□□ -1.99
USP13Q92995 RNU6-1059P-201ENST00000363752 98 ntBASIC2.65□□□□□ -1.99
USP13Q92995 RNU6-593P-201ENST00000364716 112 ntBASIC2.65□□□□□ -1.99
USP13Q92995 Y_RNA.395-201ENST00000383945 109 ntBASIC2.65□□□□□ -1.99
USP13Q92995 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
USP13Q92995 Y_RNA.594-201ENST00000410373 140 ntBASIC2.65□□□□□ -1.99
USP13Q92995 USP9YP30-201ENST00000430729 455 ntBASIC2.65□□□□□ -1.99
USP13Q92995 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.65□□□□□ -1.99
USP13Q92995 PCMTD1P1-201ENST00000455560 355 ntBASIC2.65□□□□□ -1.99
USP13Q92995 Y_RNA.631-201ENST00000459607 101 ntBASIC2.65□□□□□ -1.99
USP13Q92995 RPS29P27-201ENST00000463711 170 ntBASIC2.65□□□□□ -1.99
USP13Q92995 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.65□□□□□ -1.99
USP13Q92995 RPL7P42-201ENST00000481005 679 ntBASIC2.65□□□□□ -1.99
USP13Q92995 AC004486.1-201ENST00000546846 233 ntBASIC2.65□□□□□ -1.99
USP13Q92995 MIR4446-201ENST00000578505 67 ntBASIC2.65□□□□□ -1.99
USP13Q92995 SNORD53-201ENST00000579969 78 ntBASIC2.65□□□□□ -1.99
USP13Q92995 MIR5092-201ENST00000583139 88 ntBASIC2.65□□□□□ -1.99
USP13Q92995 AC018462.2-201ENST00000605375 395 ntBASIC2.65□□□□□ -1.99
USP13Q92995 AC009229.3-201ENST00000608056 282 ntBASIC2.65□□□□□ -1.99
USP13Q92995 PART1_1.1-201ENST00000611761 217 ntBASIC2.65□□□□□ -1.99
USP13Q92995 AL161423.1-201ENST00000613700 262 ntBASIC2.65□□□□□ -1.99
USP13Q92995 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.65□□□□□ -1.99
USP13Q92995 U4.3-201ENST00000621047 82 ntBASIC2.65□□□□□ -1.99
USP13Q92995 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.65□□□□□ -1.99
USP13Q92995 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USP13Q92995 AP006437.1-201ENST00000641440 3685 ntBASIC2.65□□□□□ -1.99
USP13Q92995 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
USP13Q92995 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.99
USP13Q92995 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.64□□□□□ -1.99
USP13Q92995 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
USP13Q92995 Y_RNA.197-201ENST00000364004 102 ntBASIC2.64□□□□□ -1.99
USP13Q92995 Y_RNA.445-201ENST00000384168 102 ntBASIC2.64□□□□□ -1.99
USP13Q92995 MIR524-201ENST00000385242 87 ntBASIC2.64□□□□□ -1.99
USP13Q92995 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
USP13Q92995 RNU6-308P-201ENST00000390957 107 ntBASIC2.64□□□□□ -1.99
USP13Q92995 SNORA26.3-201ENST00000391119 136 ntBASIC2.64□□□□□ -1.99
USP13Q92995 AL139095.1-201ENST00000404326 391 ntBASIC2.64□□□□□ -1.99
USP13Q92995 RNU6-1050P-201ENST00000410388 107 ntBASIC2.64□□□□□ -1.99
USP13Q92995 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.64□□□□□ -1.99
USP13Q92995 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.64□□□□□ -1.99
USP13Q92995 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.64□□□□□ -1.99
USP13Q92995 MIR2053-201ENST00000459295 91 ntBASIC2.64□□□□□ -1.99
USP13Q92995 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.64□□□□□ -1.99
USP13Q92995 RNU1-41P-201ENST00000516161 162 ntBASIC2.64□□□□□ -1.99
USP13Q92995 RNU1-48P-201ENST00000516400 162 ntBASIC2.64□□□□□ -1.99
USP13Q92995 RNU6-965P-201ENST00000516721 96 ntBASIC2.64□□□□□ -1.99
USP13Q92995 RNU1-54P-201ENST00000517181 120 ntBASIC2.64□□□□□ -1.99
USP13Q92995 RNU6-667P-201ENST00000517186 102 ntBASIC2.64□□□□□ -1.99
USP13Q92995 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.64□□□□□ -1.99
USP13Q92995 CPDP1-201ENST00000579660 283 ntBASIC2.64□□□□□ -1.99
USP13Q92995 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
USP13Q92995 Z98751.3-201ENST00000604447 521 ntBASIC2.64□□□□□ -1.99
USP13Q92995 MIR3976-201ENST00000606807 139 ntBASIC2.64□□□□□ -1.99
USP13Q92995 MIR8076-201ENST00000611401 83 ntBASIC2.64□□□□□ -1.99
USP13Q92995 uc_338.22-201ENST00000622722 187 ntBASIC2.64□□□□□ -1.99
USP13Q92995 AC064859.1-201ENST00000624741 174 ntBASIC2.64□□□□□ -1.99
USP13Q92995 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
USP13Q92995 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP13Q92995 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP13Q92995 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
USP13Q92995 SNORA67.1-201ENST00000364749 141 ntBASIC2.63□□□□□ -1.99
USP13Q92995 SNORA36A-201ENST00000384221 132 ntBASIC2.63□□□□□ -1.99
USP13Q92995 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
USP13Q92995 SNORA46.1-201ENST00000391069 153 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms