Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.64□□□□□ -1.83
BRF1Q92994 AL109809.4-201ENST00000603520 2185 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRF1Q92994 SNORA63.1-201ENST00000362493 131 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 Y_RNA.180-201ENST00000363867 113 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 RNU6-245P-201ENST00000384020 107 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 RNU6-21P-201ENST00000384710 107 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 Y_RNA.569-201ENST00000384749 103 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 SNORA46-201ENST00000384762 135 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 SNORA11-201ENST00000408789 128 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 RNU4-30P-201ENST00000410245 143 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 Y_RNA.595-201ENST00000410403 105 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 AC010095.1-201ENST00000443543 144 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 AL441985.1-201ENST00000457727 251 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 RN7SL504P-201ENST00000494496 287 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 AIG1P1-201ENST00000503376 148 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.64□□□□□ -1.83
BRF1Q92994 RNU7-110P-201ENST00000516891 62 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 AC233702.2-202ENST00000562547 291 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.64□□□□□ -1.83
BRF1Q92994 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.64□□□□□ -1.83
BRF1Q92994 AC037487.3-201ENST00000606668 112 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 MIR92B-201ENST00000607575 96 ntBASIC3.64□□□□□ -1.83
BRF1Q92994 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.64□□□□□ -1.83
BRF1Q92994 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
BRF1Q92994 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
BRF1Q92994 RNA5SP295-201ENST00000362655 121 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 RNU6-750P-201ENST00000390946 107 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 RPL21P3-201ENST00000395517 478 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 AC006028.1-201ENST00000438379 402 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF1Q92994 AC146507.2-201ENST00000460608 476 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 RN7SL75P-201ENST00000461926 281 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 RPL7P49-201ENST00000471402 708 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 RN7SL20P-201ENST00000488827 297 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 PHBP14-201ENST00000512887 367 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 AC074133.1-201ENST00000515696 183 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.63□□□□□ -1.83
BRF1Q92994 AC105137.2-201ENST00000569073 466 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF1Q92994 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.63□□□□□ -1.83
BRF1Q92994 AC006111.3-201ENST00000622137 383 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 SNORD98-201ENST00000636377 67 ntBASIC3.63□□□□□ -1.83
BRF1Q92994 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRF1Q92994 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRF1Q92994 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRF1Q92994 RNU6-1010P-201ENST00000362757 107 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 Y_RNA.76-201ENST00000362931 109 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 Y_RNA.83-201ENST00000363005 113 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 RNU6-1175P-201ENST00000365200 107 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 SNORD15B-201ENST00000384714 146 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 MIR34B-201ENST00000385076 84 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 EI24P2-201ENST00000397776 1076 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF1Q92994 snoU13.14-201ENST00000459372 104 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 COX6CP14-201ENST00000469580 174 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 SNORA31.1-201ENST00000515993 133 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 RNU5F-2P-201ENST00000516066 82 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 SNORA31.5-201ENST00000516190 133 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 Y_RNA.683-201ENST00000516508 93 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 RPS15AP11-201ENST00000594193 385 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.62□□□□□ -1.83
BRF1Q92994 AL357075.2-201ENST00000614906 189 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 AC093831.2-201ENST00000624393 3427 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 AC010889.1-201ENST00000566193 2666 ntBASIC3.62□□□□□ -1.83
BRF1Q92994 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
BRF1Q92994 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
BRF1Q92994 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRF1Q92994 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.61□□□□□ -1.83
BRF1Q92994 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRF1Q92994 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
BRF1Q92994 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRF1Q92994 AC073325.2-201ENST00000339545 159 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 Y_RNA.136-201ENST00000363444 102 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.61□□□□□ -1.83
BRF1Q92994 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.61□□□□□ -1.83
BRF1Q92994 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.61□□□□□ -1.83
BRF1Q92994 UQCRHP3-201ENST00000451503 251 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 Y_RNA.644-201ENST00000459006 113 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 Y_RNA.674-201ENST00000516362 113 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.61□□□□□ -1.83
BRF1Q92994 CBX3P4-201ENST00000538909 354 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.61□□□□□ -1.83
BRF1Q92994 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.61□□□□□ -1.83
BRF1Q92994 AC012493.2-201ENST00000595083 291 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 AL391813.1-201ENST00000603098 260 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BRF1Q92994 MTND5P35-201ENST00000557537 1720 ntBASIC3.61□□□□□ -1.83
BRF1Q92994 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRF1Q92994 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
BRF1Q92994 ZNF204P-201ENST00000416749 2397 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.6□□□□□ -1.83
BRF1Q92994 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BRF1Q92994 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.6□□□□□ -1.83
BRF1Q92994 UBE2WP1-201ENST00000362030 340 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 RNU6-799P-201ENST00000363567 107 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 Y_RNA.179-201ENST00000363844 90 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 Y_RNA.199-201ENST00000364014 102 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms