Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL159153.1-201ENST00000619688 317 ntBASIC3.43□□□□□ -1.86
RTF1Q92541 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
RTF1Q92541 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RTF1Q92541 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTF1Q92541 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RTF1Q92541 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RTF1Q92541 AC092435.3-201ENST00000565538 3654 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 RNU4-82P-201ENST00000362443 140 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 Y_RNA.27-201ENST00000362540 103 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 RNU6-1285P-201ENST00000363480 105 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 Y_RNA.210-201ENST00000364161 110 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 Y_RNA.358-201ENST00000365491 99 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 Y_RNA.504-201ENST00000384481 104 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 Y_RNA.556-201ENST00000384677 113 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 MIR153-2-201ENST00000385225 87 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 SNORA26.3-201ENST00000391119 136 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.42□□□□□ -1.86
RTF1Q92541 AC244670.1-201ENST00000436879 112 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.42□□□□□ -1.86
RTF1Q92541 GPM6BP3-201ENST00000442797 145 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.42□□□□□ -1.86
RTF1Q92541 FCF1P4-201ENST00000448326 183 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 RPS3P1-201ENST00000456781 192 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 AC087477.1-201ENST00000465747 340 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 RNA5SP148-201ENST00000516527 94 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 AC034114.1-201ENST00000520293 285 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 AL442163.3-201ENST00000554110 156 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 AC007375.1-201ENST00000554513 578 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
RTF1Q92541 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.42□□□□□ -1.86
RTF1Q92541 AC090617.3-201ENST00000573670 475 ntBASIC3.42□□□□□ -1.86
RTF1Q92541 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RTF1Q92541 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RTF1Q92541 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.42□□□□□ -1.86
RTF1Q92541 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
RTF1Q92541 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.42□□□□□ -1.86
RTF1Q92541 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTF1Q92541 RNU1-76P-201ENST00000362903 159 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 RPL21P75-201ENST00000396599 483 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 RPL21P1-201ENST00000399532 476 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 RPL21P28-201ENST00000401418 483 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 CYCSP48-201ENST00000417124 323 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AL590556.1-201ENST00000423231 483 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AL731563.1-201ENST00000442202 214 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 OSTCP8-201ENST00000445117 448 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 RNU7-87P-201ENST00000459343 62 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 RPL21P39-201ENST00000463605 483 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 TOMM22P6-201ENST00000465035 409 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AC087190.1-201ENST00000484462 480 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AC107032.1-201ENST00000485945 480 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AC132942.1-201ENST00000486753 483 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AC093591.1-201ENST00000491435 481 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 RPL21P16-201ENST00000495531 483 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.41□□□□□ -1.86
RTF1Q92541 AC115990.1-201ENST00000526957 301 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.41□□□□□ -1.86
RTF1Q92541 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.41□□□□□ -1.86
RTF1Q92541 AC021231.3-201ENST00000558497 370 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
RTF1Q92541 AC078899.3-201ENST00000599065 212 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 AL391813.1-201ENST00000603098 260 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 MIR6733-201ENST00000635723 61 ntBASIC3.41□□□□□ -1.86
RTF1Q92541 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RTF1Q92541 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
RTF1Q92541 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.41□□□□□ -1.86
RTF1Q92541 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTF1Q92541 Z75746.1-201ENST00000440243 2080 ntBASIC3.4□□□□□ -1.86
RTF1Q92541 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
RTF1Q92541 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.4□□□□□ -1.86
RTF1Q92541 Y_RNA.193-201ENST00000363979 102 ntBASIC3.4□□□□□ -1.87
RTF1Q92541 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.4□□□□□ -1.87
RTF1Q92541 AL031183.1-201ENST00000457667 207 ntBASIC3.4□□□□□ -1.87
RTF1Q92541 SNRPGP7-201ENST00000469016 106 ntBASIC3.4□□□□□ -1.87
RTF1Q92541 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.4□□□□□ -1.87
RTF1Q92541 RNA5SP76-201ENST00000516277 87 ntBASIC3.4□□□□□ -1.87
RTF1Q92541 AP002770.2-201ENST00000543613 532 ntBASIC3.4□□□□□ -1.87
RTF1Q92541 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.4□□□□□ -1.87
RTF1Q92541 AL450472.1-202ENST00000637286 180 ntBASIC3.4□□□□□ -1.87
RTF1Q92541 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.39□□□□□ -1.87
RTF1Q92541 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTF1Q92541 RNU6-238P-201ENST00000363313 106 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 RNU6-137P-201ENST00000363680 108 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 RNU6-702P-201ENST00000364982 107 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 RNY3P4-201ENST00000384428 101 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 MIR32-201ENST00000384965 70 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 MIR887-201ENST00000401258 79 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 AL590004.2-201ENST00000404787 371 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 SNORD88.1-201ENST00000408684 91 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.39□□□□□ -1.87
RTF1Q92541 RPL21P2-201ENST00000440049 481 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 RPL30P12-201ENST00000474666 353 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 SNORA25.11-201ENST00000515935 105 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 RNU6-1143P-201ENST00000516125 104 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 AC006006.1-201ENST00000603082 144 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 AL121655.1-201ENST00000605811 308 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 AC096772.1-201ENST00000609146 564 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 AL359198.2-201ENST00000611836 194 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 AC010205.1-201ENST00000616668 449 ntBASIC3.39□□□□□ -1.87
RTF1Q92541 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms