Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PCMTD1P1-201ENST00000455560 355 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 RNU7-187P-201ENST00000458985 68 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 RPS15AP34-201ENST00000487776 387 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.5□□□□□ -2.01
SNED1Q8TER0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 SNORA31.3-201ENST00000516029 96 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 AC069113.1-201ENST00000517763 267 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 RNU6-85P-201ENST00000605989 107 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 snoU13.31-201ENST00000607291 104 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNED1Q8TER0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.49□□□□□ -2.01
SNED1Q8TER0 RNU6-270P-201ENST00000364131 105 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 RNU6-450P-201ENST00000364654 107 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 Y_RNA.314-201ENST00000365114 102 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 SNORA63.7-201ENST00000365579 123 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 RNU6-1329P-201ENST00000365664 107 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 MIR489-201ENST00000384923 84 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 MIR325-201ENST00000385260 98 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 RNU6-1109P-201ENST00000391187 107 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC243428.1-201ENST00000421099 264 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 HMGB1P9-201ENST00000429856 646 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC099799.1-201ENST00000439809 192 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC245517.4-201ENST00000448601 281 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 CECR9-201ENST00000453421 199 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AL049874.1-201ENST00000489560 388 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC018437.1-201ENST00000492214 406 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 MTND3P25-201ENST00000509243 135 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 RNU6-1256P-201ENST00000516539 103 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 RNU6-914P-201ENST00000516749 109 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC104576.1-201ENST00000524225 88 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.49□□□□□ -2.01
SNED1Q8TER0 ELOCP5-201ENST00000604924 333 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AC011373.1-201ENST00000607270 237 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 U2.1-201ENST00000618978 145 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 UCA1.1-201ENST00000620952 75 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AL031601.2-202ENST00000622650 282 ntBASIC2.49□□□□□ -2.01
SNED1Q8TER0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.49□□□□□ -2.01
SNED1Q8TER0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SNED1Q8TER0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SNED1Q8TER0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SNED1Q8TER0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNED1Q8TER0 Y_RNA.39-201ENST00000362620 98 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 Y_RNA.152-201ENST00000363578 100 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SNED1Q8TER0 RNU6-790P-201ENST00000384479 105 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 Y_RNA.556-201ENST00000384677 113 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 RNU6-823P-201ENST00000391042 103 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 U3.37-201ENST00000408528 213 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 RNU6-847P-201ENST00000411115 108 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.48□□□□□ -2.01
SNED1Q8TER0 Z98949.2-201ENST00000440996 144 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 PIGFP3-201ENST00000441918 722 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 AL353752.1-201ENST00000454946 260 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 RPL31P41-201ENST00000477967 372 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 RNU4-77P-201ENST00000516692 156 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.48□□□□□ -2.01
SNED1Q8TER0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.48□□□□□ -2.01
SNED1Q8TER0 AC103810.1-201ENST00000579873 453 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 OR1M4P-201ENST00000589199 287 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 AC100812.1-201ENST00000607622 580 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 AL606534.2-204ENST00000635008 178 ntBASIC2.48□□□□□ -2.01
SNED1Q8TER0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNED1Q8TER0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNED1Q8TER0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SNED1Q8TER0 RNU6-741P-201ENST00000383889 107 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 MIR583-201ENST00000384846 75 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 SNORD73A-201ENST00000386062 65 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 RNU6-321P-201ENST00000410912 106 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 AC099548.1-201ENST00000421443 426 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 MRPS18CP6-201ENST00000423587 223 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.47□□□□□ -2.01
SNED1Q8TER0 AL031274.1-201ENST00000450334 232 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 AC010655.3-201ENST00000478818 450 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 AC011005.2-201ENST00000487324 359 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
SNED1Q8TER0 AC113155.1-201ENST00000511141 769 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 RNA5SP182-201ENST00000516064 82 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 RNU6-143P-201ENST00000516942 93 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 SUB1P3-201ENST00000564581 315 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 AC005951.2-201ENST00000576282 495 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 MIR4255-201ENST00000579351 72 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 MIR3683-201ENST00000580847 82 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 MIR4273-201ENST00000582824 84 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 SNORD58B-201ENST00000607313 66 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.47□□□□□ -2.01
SNED1Q8TER0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SNED1Q8TER0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.46□□□□□ -2.01
SNED1Q8TER0 Y_RNA.48-201ENST00000362710 103 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 RNU6-379P-201ENST00000363813 104 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 SNORD14.1-201ENST00000365609 90 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 Y_RNA.380-201ENST00000365663 111 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 RNU6-784P-201ENST00000384330 106 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 MIR578-201ENST00000384828 96 ntBASIC2.46□□□□□ -2.02
SNED1Q8TER0 MIR9-3-201ENST00000385084 90 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms